| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0217 |
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| Symbol | |
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| ID | 5613302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 248722 |
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| End bp | 249012 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640931043 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471958 |
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| Protein GI | 157373358 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3776] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTG TAATTACTAC AGGTAAGGCT GTCACCCTAT TTGCCTGGCT TTTGATGACA
TACAACCTGA TCATGCCATT TGAAGGCAAT ATTGCCATCA TTCTATATAT ACTGCTGGCA
ATCACCACAT TTATGCACTG TTTTCAGGTC GTTATATTCC ACACCATATT CAAATCACTA
CTCTCTTTAA AGAAAGGTGA CTACTTCAGT GTCTTTATAT TTGGGGCATT TAGCCTGTTG
CAATATAGAA GTAAGGTAAT GCAGAACTTA GGTAATGCGG AGACCAGGTA A
|
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| Protein sequence | MKFVITTGKA VTLFAWLLMT YNLIMPFEGN IAIILYILLA ITTFMHCFQV VIFHTIFKSL
LSLKKGDYFS VFIFGAFSLL QYRSKVMQNL GNAETR
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