Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0212 |
Symbol | |
ID | 5612989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 244575 |
End bp | 245153 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931038 |
Product | hypothetical protein |
Protein accession | YP_001471953 |
Protein GI | 157373353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT TGTTAAGCCT AGTTTTATCA GTCTTTATTC TAGTTTCAAT GGTGCCGGCA GCTTCTGCAC ATCAGCACGA ACATGCACAA CATGAAAGTG CCGATTATGC ATGCCCTATG CACCCGGAAG TTACCGGACA GAAGGGTGAT AGCTGCCCAA AATGCGGTAT GAATTTAGAA GCAAATAAGG CTACTACCTC TAAACATCAG GGGAAAAAAT GTGACTCTTG CCCTAACCAT AAAGCGAAAG CACATAAGGA TATGCATGCA GATACCCATG CCTGTCCAAT GCACCCAAGT GTTACCGGAG AAAAGGGCGA TACTTGCCCT GATTGCGGTA TGAACTTAAC CGCCTCTAAA GCAGCTTCCC AACATCATGG AAAAAAATGC GATTCTTGCC CTAATCACGG AGCAAAAGCG CATAAGGATA TGCATGCTGA CACTCATGCC TGCCCTATGA ATCCAAAGAT CACAGGAAAA AAGGGTGATA CCTGCCCTAA ATGTGGAATG AACTTAGAGC CAATCAAAAC GGCGGCTAAC GGAGCAGGGA AACACCCAGC TCACCACAAG CAGCAATAA
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Protein sequence | MKTLLSLVLS VFILVSMVPA ASAHQHEHAQ HESADYACPM HPEVTGQKGD SCPKCGMNLE ANKATTSKHQ GKKCDSCPNH KAKAHKDMHA DTHACPMHPS VTGEKGDTCP DCGMNLTASK AASQHHGKKC DSCPNHGAKA HKDMHADTHA CPMNPKITGK KGDTCPKCGM NLEPIKTAAN GAGKHPAHHK QQ
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