Gene Ssed_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0212 
Symbol 
ID5612989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp244575 
End bp245153 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content46% 
IMG OID640931038 
Producthypothetical protein 
Protein accessionYP_001471953 
Protein GI157373353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCT TGTTAAGCCT AGTTTTATCA GTCTTTATTC TAGTTTCAAT GGTGCCGGCA 
GCTTCTGCAC ATCAGCACGA ACATGCACAA CATGAAAGTG CCGATTATGC ATGCCCTATG
CACCCGGAAG TTACCGGACA GAAGGGTGAT AGCTGCCCAA AATGCGGTAT GAATTTAGAA
GCAAATAAGG CTACTACCTC TAAACATCAG GGGAAAAAAT GTGACTCTTG CCCTAACCAT
AAAGCGAAAG CACATAAGGA TATGCATGCA GATACCCATG CCTGTCCAAT GCACCCAAGT
GTTACCGGAG AAAAGGGCGA TACTTGCCCT GATTGCGGTA TGAACTTAAC CGCCTCTAAA
GCAGCTTCCC AACATCATGG AAAAAAATGC GATTCTTGCC CTAATCACGG AGCAAAAGCG
CATAAGGATA TGCATGCTGA CACTCATGCC TGCCCTATGA ATCCAAAGAT CACAGGAAAA
AAGGGTGATA CCTGCCCTAA ATGTGGAATG AACTTAGAGC CAATCAAAAC GGCGGCTAAC
GGAGCAGGGA AACACCCAGC TCACCACAAG CAGCAATAA
 
Protein sequence
MKTLLSLVLS VFILVSMVPA ASAHQHEHAQ HESADYACPM HPEVTGQKGD SCPKCGMNLE 
ANKATTSKHQ GKKCDSCPNH KAKAHKDMHA DTHACPMHPS VTGEKGDTCP DCGMNLTASK
AASQHHGKKC DSCPNHGAKA HKDMHADTHA CPMNPKITGK KGDTCPKCGM NLEPIKTAAN
GAGKHPAHHK QQ