| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0202 |
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| Symbol | |
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| ID | 5612906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 230224 |
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| End bp | 231480 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931028 |
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| Product | aromatic amino acid transporter |
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| Protein accession | YP_001471943 |
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| Protein GI | 157373343 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACC ATATGAACGC TGCTAAAGAT GGAGCAGCGA GTAAATCTTT GCTTGGTGGA
GCCATGATCA TCGCCGGAAC TGCGGTCGGG GCGGGAATGT TCTCATTGCC TGTTGTGGGT
GCCGGTATGT GGTTTTCCTA TTCACTTGTC ATGATGTTAG GTGTCTGGTT CTGTATGCTG
GTGTCGGGTC TGTTGTTACT CGAGACCAAT CTACACTTCG AGCCCGGTGA TAGCTTCGAT
ACCCTGACAC GGGAAACCTT AGGTAACTTT TGGCGAATAG TGAATGGTTT ATCAATCGCA
TTCGTACTCT ATATTTTGGC CTATGCCTAT ATCAGTGGTG GCGGCTCTAT CGTTAATCAC
AGTTTAGCGG CTGCAGGGAT CGAACTGCCA CAAAGCTTGG CCGGGCTGGT ATTTGCGCTG
GGTTTGGCCT TTATCGTCTT TATCAGTACT AAGGCTGTCG ATAGGATCAC GACCATTATG
CTTGGCGGAA TGATCATCAC TTTCTTTCTC GCCGTAGGTA ATTTACTGAT AGAGATCGAT
ACGGTGAAGT TGTTCACGCC AGATGGAGAG AGCCGATATC TGCCCTATAT GTTGGCGGCT
ATCCCCTTTG GATTAGTGAG CTTTGGTTAT CATGGTAATG TGCCCAGCCT GGTTAAATAC
TATGGGAAAG ACGCCAGCAC CATTATAAAA GCGATTGTCA CCGGAACCCT GATAGCCTTC
GTTATCTATG TGTGCTGGTT GGTGGCGACC ATGGGGAATA TCCCTCGCAA TGATTTTGTC
GATATTATTG CCCAGGGTGG CAATATGGGG GTACTGGTTA GCGCCCTATC CGATGTGATG
AGCAGTGGTT GGTTAACGAC CATGCTAACG GTTTTTGCTA ACCTGGCGGT AGCTTCCTCT
TTCTTAGGAG TTACCTTAGG ATTATTCGAT TACCTGGCCG ATCTCTTTGG TTTCGATGAG
TCTCGTAGCG GTCGTTTTAA AACGGCAGCG GTAACTTTCC TGCCACCGAC GGTACTGGGG
TTGTTGTTCC CTAATGGTTT CCTGATTGCA ATAGGTTTTG CGGCACTGGC AGCGACTATC
TGGGCGGCGA TTGTGCCGGC TATGATGGCC TATAAAGCCC GGAAGCTCTA TCCAAACAGC
GAGAGCTTTA GGGTTCCTGG TGGGACCTTT GTGATTGCCA TCGTCATTTT GTTTGGTGTG
GTCACCGGAG CGTGTCATCT GCTTGCGATG GCAGAGTTAT TGCCTGTTTA CGGTTAG
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| Protein sequence | MANHMNAAKD GAASKSLLGG AMIIAGTAVG AGMFSLPVVG AGMWFSYSLV MMLGVWFCML
VSGLLLLETN LHFEPGDSFD TLTRETLGNF WRIVNGLSIA FVLYILAYAY ISGGGSIVNH
SLAAAGIELP QSLAGLVFAL GLAFIVFIST KAVDRITTIM LGGMIITFFL AVGNLLIEID
TVKLFTPDGE SRYLPYMLAA IPFGLVSFGY HGNVPSLVKY YGKDASTIIK AIVTGTLIAF
VIYVCWLVAT MGNIPRNDFV DIIAQGGNMG VLVSALSDVM SSGWLTTMLT VFANLAVASS
FLGVTLGLFD YLADLFGFDE SRSGRFKTAA VTFLPPTVLG LLFPNGFLIA IGFAALAATI
WAAIVPAMMA YKARKLYPNS ESFRVPGGTF VIAIVILFGV VTGACHLLAM AELLPVYG
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