Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0199 |
Symbol | |
ID | 5612903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 226521 |
End bp | 227033 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931025 |
Product | hypothetical protein |
Protein accession | YP_001471940 |
Protein GI | 157373340 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG5404] SOS-response cell division inhibitor, blocks FtsZ ring formation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTCAT TAATTGGCAA CAGTCCACGT CACCCTGGGT TATGGGTAAA TCTTGAAGAT CCATTATCGA ATGAACTGCA AGGCTGCACA GTCTCTTCAG TAACAACTCA TACCCAAGGG CGTGATGAAT TGCAGATGCT GAGTGCCCAA CTGGCTTCAT TGAGTCATCG AGGTCAGTGG ATTGTGCTGA TTAGTCCTCC GAACATAGGT TACAAACAGA TGTTAACCGA TGCCGGAGTG AGGATGGATA GAGTCCTGCT CGTTCATGCT AAAGATGAAG TTGAAACCCT GTGGGCCATG GAAAAAGCAC TCACAAGTGG TACATCCAGT GCCGTTATAA GTTGGACCCA ATCCTTAGAT GCAAGAGATA ATCGTCGCCT ACAGATCGTC GCTAAAAGTG CTCGTGCAGT AGGTATTGTG ATTGAAGTTG CGAATGGCCA CTTACATGGA AAAGCCCACA TGAACGGCGT TGAGGCATTT AATCAACCCA GTTTGTTTGG TTCATTACAC TAG
|
Protein sequence | MNSLIGNSPR HPGLWVNLED PLSNELQGCT VSSVTTHTQG RDELQMLSAQ LASLSHRGQW IVLISPPNIG YKQMLTDAGV RMDRVLLVHA KDEVETLWAM EKALTSGTSS AVISWTQSLD ARDNRRLQIV AKSARAVGIV IEVANGHLHG KAHMNGVEAF NQPSLFGSLH
|
| |