Gene Ssed_0199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0199 
Symbol 
ID5612903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp226521 
End bp227033 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content46% 
IMG OID640931025 
Producthypothetical protein 
Protein accessionYP_001471940 
Protein GI157373340 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG5404] SOS-response cell division inhibitor, blocks FtsZ ring formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCAT TAATTGGCAA CAGTCCACGT CACCCTGGGT TATGGGTAAA TCTTGAAGAT 
CCATTATCGA ATGAACTGCA AGGCTGCACA GTCTCTTCAG TAACAACTCA TACCCAAGGG
CGTGATGAAT TGCAGATGCT GAGTGCCCAA CTGGCTTCAT TGAGTCATCG AGGTCAGTGG
ATTGTGCTGA TTAGTCCTCC GAACATAGGT TACAAACAGA TGTTAACCGA TGCCGGAGTG
AGGATGGATA GAGTCCTGCT CGTTCATGCT AAAGATGAAG TTGAAACCCT GTGGGCCATG
GAAAAAGCAC TCACAAGTGG TACATCCAGT GCCGTTATAA GTTGGACCCA ATCCTTAGAT
GCAAGAGATA ATCGTCGCCT ACAGATCGTC GCTAAAAGTG CTCGTGCAGT AGGTATTGTG
ATTGAAGTTG CGAATGGCCA CTTACATGGA AAAGCCCACA TGAACGGCGT TGAGGCATTT
AATCAACCCA GTTTGTTTGG TTCATTACAC TAG
 
Protein sequence
MNSLIGNSPR HPGLWVNLED PLSNELQGCT VSSVTTHTQG RDELQMLSAQ LASLSHRGQW 
IVLISPPNIG YKQMLTDAGV RMDRVLLVHA KDEVETLWAM EKALTSGTSS AVISWTQSLD
ARDNRRLQIV AKSARAVGIV IEVANGHLHG KAHMNGVEAF NQPSLFGSLH