| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0193 |
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| Symbol | |
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| ID | 5612666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 220444 |
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| End bp | 221202 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931019 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471934 |
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| Protein GI | 157373334 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3346] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAACAA ATAATGTATT CACTCGTTAT CCTCAACTGT ATCTGGTGGG TTCAAGAGCC
TTGCTTATTA TTATCACTGT GAGTCTGTTT CTCTTTTTGG TCAAGTTAGG ATTCTGGCAA
CTGTCTCGCG CCGAAGAAAA AGAGTTATGG CAGACCCAAT TGACGACACG TCAAGCTGCC
GACTCACTCT CTTATGCAGA GCTACTATCA CTACCTGAAG CAGAGTCACT AACGGGATAC
CGACTCACAG TAACTGCACA GCCGCTCGCT GAGCAGGTTT TTCTACTCGA TAATCAGGTC
TTTAATGGCA GGGTTGGTTA CTTAGCACTG CAACTTATGG AGGTCACTCC CGATCGACCT
TGGTTGCTGG TTGAGTTAGG TTTTATACCC GCAACCGCAA ACAGGGAAAG CTTACCCGCA
ATAAAGCCAA TAACAATGAG TCAGAGCCTT ACCGGGCGGC TATATCAGAA ACAGAGTAAC
CCGATGAGCA GCGCACTCAT GGCCGAACCG GGTTGGCCAA AACGCATTCA GAATCTTAAT
GTCGGCGAAA TGCGTGATTT GGTCAATCGT CCCATAGCCG CAGCTGTACT TCAGCCCGAA
ACAATTAAGG GCATTGACTT GCCTCATCCC TGGAAACCGA TCCCGCTGTC GGCTCAAAAA
CACAGGGGCT ATGCGCTACA GTGGTTTTCG ATGGCTTTCG CATTCGCGAT ATTAGTCCTA
TTCTTTATTT ACAGCAGAAA ACGAAGAAAG AACAGATAG
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| Protein sequence | MKTNNVFTRY PQLYLVGSRA LLIIITVSLF LFLVKLGFWQ LSRAEEKELW QTQLTTRQAA
DSLSYAELLS LPEAESLTGY RLTVTAQPLA EQVFLLDNQV FNGRVGYLAL QLMEVTPDRP
WLLVELGFIP ATANRESLPA IKPITMSQSL TGRLYQKQSN PMSSALMAEP GWPKRIQNLN
VGEMRDLVNR PIAAAVLQPE TIKGIDLPHP WKPIPLSAQK HRGYALQWFS MAFAFAILVL
FFIYSRKRRK NR
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