| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0192 |
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| Symbol | |
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| ID | 5612665 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 219698 |
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| End bp | 220243 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931018 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471933 |
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| Protein GI | 157373333 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACTCCC CCAAGAAGAG CGGTGCCAAA CCACTGATAA TTTTATTATT GGTCTTTTTA
CTTCCTGTTG TCGCCGCAAA AATTGTACTT AGCATGAATC TCTATCATGG TGGTGCGACC
AATAAAGGTG AACTGCTCTC CCCCGAAACC AGTTATGCCA GCTTGGCAAT GGAAAATCCC
AGACCCCATG AATGGCAGAT TCTTTATCTG CTCCCCAGCG ATTGTGACGC CTTGTGCCTG
GATCGTCTCT ATATCCTCAA GCAGAGCCAT ATTGCACTGG GCAGAGAACA AAACAGGGTT
CACACCATGA TTTTACTCAC CGAAAGCAGC GATATCTCGG CACTAAAACT TCACTCTTTC
GAAACAGTTA AAGCCAGCAC CGCAATGATA AACATACTCA ACGACCAGCA GATGGTCATT
GTTGACCCTC TGGGAAGTTT AGTCATGCGT TACTCGAAGG TCTCAGGTCG AGCCAAACAG
ATCCTGCAGG GTAAATCCTT AGTTTCAGAC TTAAGAAAAA TGCTTAAGTT ATCGAGGGTC
GGGTAA
|
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| Protein sequence | MNSPKKSGAK PLIILLLVFL LPVVAAKIVL SMNLYHGGAT NKGELLSPET SYASLAMENP
RPHEWQILYL LPSDCDALCL DRLYILKQSH IALGREQNRV HTMILLTESS DISALKLHSF
ETVKASTAMI NILNDQQMVI VDPLGSLVMR YSKVSGRAKQ ILQGKSLVSD LRKMLKLSRV
G
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