Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0188 |
Symbol | |
ID | 5611745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 216534 |
End bp | 216830 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640931014 |
Product | hypothetical protein |
Protein accession | YP_001471929 |
Protein GI | 157373329 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGATC AAACCATTAA ATTAGATTCA GAATTAACCA TTAGAAATAT TCAGCCCATA TTTGCGCGAC TTTCTGAGCT ATTAACACAC GATAAATTAC TCCATATAGA CGTCAGTCAA CTATCCCGTG TCGATACAGC TGGTGCTCAA CTCCTTTATC TATTTTCCCA AACATGCAAT GCACGCTCCC TAAAGGTTGA ATGGCAAGGG GGTCAGCCGG AGCTAAGATC TAACTTAAAA AGCTTAGGTA TCGTCATCCC GGAACTTCAG AGTGATACAC AGGAGAAGAT GCTATGA
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Protein sequence | MTDQTIKLDS ELTIRNIQPI FARLSELLTH DKLLHIDVSQ LSRVDTAGAQ LLYLFSQTCN ARSLKVEWQG GQPELRSNLK SLGIVIPELQ SDTQEKML
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