Gene Ssed_0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0188 
Symbol 
ID5611745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp216534 
End bp216830 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content41% 
IMG OID640931014 
Producthypothetical protein 
Protein accessionYP_001471929 
Protein GI157373329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGATC AAACCATTAA ATTAGATTCA GAATTAACCA TTAGAAATAT TCAGCCCATA 
TTTGCGCGAC TTTCTGAGCT ATTAACACAC GATAAATTAC TCCATATAGA CGTCAGTCAA
CTATCCCGTG TCGATACAGC TGGTGCTCAA CTCCTTTATC TATTTTCCCA AACATGCAAT
GCACGCTCCC TAAAGGTTGA ATGGCAAGGG GGTCAGCCGG AGCTAAGATC TAACTTAAAA
AGCTTAGGTA TCGTCATCCC GGAACTTCAG AGTGATACAC AGGAGAAGAT GCTATGA
 
Protein sequence
MTDQTIKLDS ELTIRNIQPI FARLSELLTH DKLLHIDVSQ LSRVDTAGAQ LLYLFSQTCN 
ARSLKVEWQG GQPELRSNLK SLGIVIPELQ SDTQEKML