| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0182 |
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| Symbol | |
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| ID | 5611417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 208820 |
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| End bp | 209857 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931008 |
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| Product | protein-glutamate methylesterase |
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| Protein accession | YP_001471923 |
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| Protein GI | 157373323 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAG TTTTAATCGT TGATGACTCT CCGCTGGTTA GGCAACTACT GACTCACCTG
CTTAGTGACA CCTCCGACAT CAGTGTCGTT GGTGCCGCCG AAGATCCCTA TGAAGCCAGA
GAGCTGATAA AAAGATTTAA CCCGGATGTG CTGACTCTGG ATATTGAGAT GCCTAAAATG
GATGGAATAG CCTTCCTGCG CAATCTCATG AAGCTCAGAC CCATGCCCGT TGTCATGATC
TCGACTCTCA CCGAAAAAGG GGCGGCTGTA ACGCTGGAAG CACTGTCCAT AGGTGCCGTT
GACTTCATCT CTAAGCCTAA GTCAGATCTG ACTAATAAAC TGATGGAATA TCGAGATGAG
CTGATTGAAA AGGTACGCTT CGCAGCCAAG AGTAAAGTCC GTCCAACCTC CCCCATTCCA
GCCCCCAAGC TCTGCACGTC ACCGACAGGC TGTTCACAGA ATCAGCTGAT TGCGATTGGT
GCCTCGACCG GTGGCACCGA AGCTATACAG CGTTTAATCT GCCAACTTCC CTCAGATGTT
CCTCCCATCG TCATAGCACA GCATATCCCG GCCGCATTTA GTGCTTCATT TGCCAAACGA
TTGGACAGTC ATGCCAGCAT GAGAGTGATA GAAGCTCAGG GTGGAGAACT ATTAAAGCCA
GGAACTGCCT ATATCGCTCC GGGAAGTGCT CACCTCATCA TCGAGAAAAG AGGAGGCCTG
CTTTATACCA GGCTCTTAGA TAGTGAGCCG GTCAACAGGC ATAAACCCTC TGTCGATGTG
CTATTCGATA GTGTCGCCGA AACTGCCGGA AAATCGGCAT TAGGCGTGAT CCTTACCGGT
ATGGGGAAAG ATGGGGCCAA AGGCTTGCTG AATATGAAAC AGAGCGGCGC TTACACTCTG
GCACAAGATG AGGCCAGCTC GGTGGTTTGG GGAATGCCGG GGGCAGCCGT AGAGCTGGAT
GCCAATTGTG AGGAGTTACA TATAGACAGG ATCCCGGCAA AGCTCCTGTC AGTCATGAAA
AATGCCTCGC AAGCTTAG
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| Protein sequence | MIKVLIVDDS PLVRQLLTHL LSDTSDISVV GAAEDPYEAR ELIKRFNPDV LTLDIEMPKM
DGIAFLRNLM KLRPMPVVMI STLTEKGAAV TLEALSIGAV DFISKPKSDL TNKLMEYRDE
LIEKVRFAAK SKVRPTSPIP APKLCTSPTG CSQNQLIAIG ASTGGTEAIQ RLICQLPSDV
PPIVIAQHIP AAFSASFAKR LDSHASMRVI EAQGGELLKP GTAYIAPGSA HLIIEKRGGL
LYTRLLDSEP VNRHKPSVDV LFDSVAETAG KSALGVILTG MGKDGAKGLL NMKQSGAYTL
AQDEASSVVW GMPGAAVELD ANCEELHIDR IPAKLLSVMK NASQA
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