| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0176 |
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| Symbol | |
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| ID | 5614114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 200878 |
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| End bp | 201672 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931002 |
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| Product | carboxylesterase |
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| Protein accession | YP_001471917 |
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| Protein GI | 157373317 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCAT CTCCCCTTCA TATCGAGTCC ATTGGTCAAG GGCAGGAGAT CATTATACTT
CACGGTTGGG GGGTGAACAG TGCCGTTTTT ACACCGCTAC ATTCTTCTCT GTCTCAGTAT
AGGGTGCACT ATGTAGATCT GCCCGGTTTT GGCCATAGCT CGATGATAGA GGGCGATATC
GATGCCTGGG TCGATGCGAT AACAAGCAGG CTATCCCATA AGGCGATCTG GGTAGGCTGG
TCATTAGGTG GACTTGTCGC AACCCGAGCC GCGCTGCGTT ATCCCGAACG GGTACAGGGA
CTGGTCACTA TCGCCTCCTC TCCCTGCTTC ATGGCAAGAG AAGAGGAGTC CTGGCCTGGG
ATCCCGCCTC AGGTATTGTC TGACTTTAGC AAGCAGCTCG GCAGTGATCT TAGTAAAACC
ATAGACCGCT TCTTAGCAAT ACAGGCCATG GGAAGTGTAA CGGCAAAAGA TGATATCAAA
CAGCTTAGAG AGCTGGTCCT ATCCAGGCCA CTTCCTGAGA CGACCGCCCT GGTGCAGGGA
CTCGATATGC TTAAGAGTGT CGATCTCCGC CCTCAAATAG CCCAGATTGA GCAACCCTGG
CTAAGGATCT GGGGACGATT AGATGGCCTG ATTCCGAGGC GGGTTCCACC TTTGATGCCT
AAAGATGAAC AGCTCTATCA GGATCTCATA CTCCACAGAG CCTCCCACGC CCCCTTCATC
TCCCACAGGG ATGAGTTCAT CACAGGCTTG GTAAGCTGGA TAGAGAAATT AGTCAGGGAT
GAACTTCTTC GATAA
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| Protein sequence | MNPSPLHIES IGQGQEIIIL HGWGVNSAVF TPLHSSLSQY RVHYVDLPGF GHSSMIEGDI
DAWVDAITSR LSHKAIWVGW SLGGLVATRA ALRYPERVQG LVTIASSPCF MAREEESWPG
IPPQVLSDFS KQLGSDLSKT IDRFLAIQAM GSVTAKDDIK QLRELVLSRP LPETTALVQG
LDMLKSVDLR PQIAQIEQPW LRIWGRLDGL IPRRVPPLMP KDEQLYQDLI LHRASHAPFI
SHRDEFITGL VSWIEKLVRD ELLR
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