| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0163 |
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| Symbol | |
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| ID | 5613086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 185896 |
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| End bp | 186738 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640930989 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471904 |
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| Protein GI | 157373304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2961] Protein involved in catabolism of external DNA |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTT ATCGCCACGG CTATCATGCC GGAAATTATG CCGATGTATT AAAGCACTCT
GTTTTATTGC AGGTGCTTAA GCTAATGCAT AAGAAGCCAA CCCCTTTTGT CTATATTGAT
ACCCATGCCG GAGCCGGCGG TTATGCTCTG AGTGATGAAT TCGCCCAAAA AACCGGAGAG
TACTTAGAGG GTGTCGCTAA GCTATGGGGA AAAGAGGATC TACCTGAACC ACTTGCTGAG
TATATTGCTG ATGTCACTCA CTTCAATCAG GGCAAACCTG AGCTCTCTTT CTATCCCGGC
TCTCCAGCCT TTGTAGATAT GAACAGCTAT GAAAAAGAGC GCATGGTATT GCATGAGCTT
CATGGCGCCG ATCACGCTCA GCTTGAAGAG CAGTTTGCCG GTGACCGATA TATTCGCATT
GTCAAAGACG ATGGCTTAAA AGGGTTAATC GCAGCGGTTC CTCCTCGTGA ACGACGCGGC
GTTATCTTAG TAGACCCAAG CTATGAGATG AAAACCGATT ATCAGGATGT GCCTAACGCG
ATAATTAAGG CCCATAAAAA GTTCGCAACT GGTGTATATA TGCTCTGGTA TCCGGTCGTT
AACCGCGCTC AAACCGAAGG CATGTTGAAA ATACTTGCTC AGAGTGGCAT TAAGAATCAG
CTACGTATCG AACAGTCAGT TAGAGCCGAT AGTGATGAAT TTGGTATGAC GGCGGCGGGT
CTGTGGATCA TCAATCCACC TTGGCAGCTC GATAGTAAAG CTGATGAGAT TTTAGAATAC
TTATCACCTT TGCTAAACCA AGGTGGCGGT AAGGTCACGA TGAAATTAGA AGTCGGTGAA
TAA
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| Protein sequence | MLSYRHGYHA GNYADVLKHS VLLQVLKLMH KKPTPFVYID THAGAGGYAL SDEFAQKTGE
YLEGVAKLWG KEDLPEPLAE YIADVTHFNQ GKPELSFYPG SPAFVDMNSY EKERMVLHEL
HGADHAQLEE QFAGDRYIRI VKDDGLKGLI AAVPPRERRG VILVDPSYEM KTDYQDVPNA
IIKAHKKFAT GVYMLWYPVV NRAQTEGMLK ILAQSGIKNQ LRIEQSVRAD SDEFGMTAAG
LWIINPPWQL DSKADEILEY LSPLLNQGGG KVTMKLEVGE
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