| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0161 |
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| Symbol | |
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| ID | 5613236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 184437 |
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| End bp | 185330 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640930987 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001471902 |
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| Protein GI | 157373302 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0599648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGGA CTCTGGCGCA GTTAGAGGCG TTTGTGCTGT CGGTTAAGTG TGGATCATTT
TCTGCGGCAG CACGAAAACT AGGCCGTGCG CAGTCAAGGG TGAGTACCGC TATTTCGAAT
CTGGAGGCCG ATCTCGGTTT TGAGTTATTT GACAGAACTG CCAAGTTGCC AGTCCTAACT
CAGCATGGCG AGGATATGTT TGTTGAGGCG CAGGCCGTGC TCGAACAGTG TCAGCGACTG
CAATCGAGGG CATTGACGGT GACCACCGGA GAGGAGATAG CGTTAACCAT TGCTATGGAT
GAAGCCGTGC CAATTAATAC GTTCGAATCA TTGATTGAGC GAGTCGCTCA GCGGTTTCCC
TTGCTTAAGC TCACCATAAT AAATGGCTCT CAGGATGATA TTGCTCAATG GGTCGATGAG
GGCAAGGCGG ATATGGGGAT ACTGTTTTAT GTTAAGTCTT TTTCTGATTC GTTGGAGTTT
ATGTCCATCG GTCAGTTTTA CCACTCATTG ATCGTATCGC CTAAGCATCC GTTATCTAAG
ATTGAGTCAC CGACTATCGA TGAACTCAAC CAATATCGCC AGTTGGTTAT CCGCGATCGC
GTCGGGAAAA ATCAGGCTAA AGCCTTGTCG GCAAATCATT GGTATATCGA TAGCTATTAT
TACATCACGG CCTTGGTTAT CAGGGGGCTC GGTTGGGCAC TGGTGCCCGA TCACCTGGCT
AATTCGGAGT GGTACACCGA TGAGGTGATT GAGTTGTCGA CAGAGAATAT TCCCGATCCT
CTGCTCGTTG AGATGGGGGT AGTGAACCGA CGCGACAGAG CCTACGGTCC TGTGATGGAG
TGGATATTCC TGGAAATTGA ATCTATGTTT AAGAATCGAC TCAAAAATGA GTAA
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| Protein sequence | MNWTLAQLEA FVLSVKCGSF SAAARKLGRA QSRVSTAISN LEADLGFELF DRTAKLPVLT
QHGEDMFVEA QAVLEQCQRL QSRALTVTTG EEIALTIAMD EAVPINTFES LIERVAQRFP
LLKLTIINGS QDDIAQWVDE GKADMGILFY VKSFSDSLEF MSIGQFYHSL IVSPKHPLSK
IESPTIDELN QYRQLVIRDR VGKNQAKALS ANHWYIDSYY YITALVIRGL GWALVPDHLA
NSEWYTDEVI ELSTENIPDP LLVEMGVVNR RDRAYGPVME WIFLEIESMF KNRLKNE
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