| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0154 |
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| Symbol | |
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| ID | 5611134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 175802 |
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| End bp | 176479 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640930980 |
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| Product | glutathione S-transferase domain-containing protein |
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| Protein accession | YP_001471895 |
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| Protein GI | 157373295 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0625] Glutathione S-transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAAGC CCTCAGCTCT ACCTGTGCTT TACTCTTTGC GAAATTGTCC CTACGCCATA
CGCGCTAGAA TGGCTATTTA TGTTTCAGGC CAAGCTGTGC AGCTGCGCGA TATAGTATTA
AGTGATAAGC CTGCTCATAT GCTCCAGGTC TCACCCAAAG GTACTGTTCC GGTTTTAGTG
CTGCAAAATG ACAAGGTGCT GGAGCAGAGC TTAGAGATAA TGATGTGGGC TTTTGGCCAA
AGTGACCCTA ACAACTACTT AATGAGCGAC AGTCCGAATA CACGAGCCGA AATGCTTAGT
TTAGTCGACC TTTTTGATAC CGAGTTTAAG TTACGGCTTG AGAAGTATCG CAGCGCAAAA
CGTTATCATG ACGAAAGTGT ATTGGAACAT AGGTTAGCTT GTGAGCAATA TTTGAAAATG
TTGGAGCTGA AGCTATCTCA ACACACATAT TTGATGTCAG ATAGCCCAAG CTTAGCGGAT
TTAGCGATAT TGCCATTTAT TCGACAGTTG GCCCGAGTTG AGCGTCAGTG GTACTTACAG
TCACCCTATC CCAATATTAG AAAATGGCTC AACGATTACT TACAAAGCCG GATGTTCAGT
AAAGTAATGT CTAAATATCC GATGTGGTTA ACAGAAAAAT CTTTGATAGT TTTTTCTGCT
GATAAGCCAT TAAGTTAA
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| Protein sequence | MNKPSALPVL YSLRNCPYAI RARMAIYVSG QAVQLRDIVL SDKPAHMLQV SPKGTVPVLV
LQNDKVLEQS LEIMMWAFGQ SDPNNYLMSD SPNTRAEMLS LVDLFDTEFK LRLEKYRSAK
RYHDESVLEH RLACEQYLKM LELKLSQHTY LMSDSPSLAD LAILPFIRQL ARVERQWYLQ
SPYPNIRKWL NDYLQSRMFS KVMSKYPMWL TEKSLIVFSA DKPLS
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