| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0137 |
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| Symbol | |
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| ID | 5612191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 152571 |
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| End bp | 153749 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930963 |
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| Product | HD domain-containing protein |
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| Protein accession | YP_001471878 |
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| Protein GI | 157373278 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2206] HD-GYP domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATT CGGTGGAATC TAAAGCACTT GTTAAATTTC CAGTGTCTAA ATTGACAGTT
GGTATGTTTG TTACCGCAAT TGATAGACAA GGCTTGGTAA AAATTTCCAA CGCCGGGCAG
ATCCGTCATC GCGATGCGAT TGCTAAATTG GTTAAGAATG GGATTAAGCA TGTGTGGGTC
GATGCTGAGC GATCTGCGGA ACATTGTGGA TTAAAACGTG CACCATCACC TAAACCCGTT
GGTAAGAAGC CCCAACAATC TCGGGAAAAA TCACAAAAAC AAGCCAAAAA ACTGATTGTC
GAGGCTAAAG ATCTCGTTAA AAAAGTCCTA TCAGAAACCT TCGAGGGAAA GGCGATAGAG
GTTGCACCTT TTGGAGCCCT TGCAGACAAT ATGATTGAGT CTGCCTTGCT CGATGCGGAT
GCCTTGAAAT GTGTATCGGC ATTGAGAACG AAAGATGCCT ATCTTCTTGA ACACTCTATC
AATGTTGCTT TTTTGCTGGT TACCTTCGGA AAATACCTCA AGTTAGAAAA AGATACGCTG
AGGCAGATGG CGATTGGCGG CATGCTACAT GATATTGGCA AAATTAAAGT TGACGACAAG
GTGCTAAATA AGCCGGGAAG ACTCACACCC GAAGAGTTTG AGCATATCAA GCTGCATCAG
GTTTTTGCCA TCGATATCAT GAAAGAGACA AAAGGCCTTT CGAGCATCAG TAAAGATGTT
TGTCTGATGC ATCATGAGAA GCTGGATGGT AATGGTTATC CGAAGGGGTT GAAGGGAGAT
GAGTTGCCGC TTCATGGGCG CATGAGTTGT ATTGTCGATA TCTTCGATGC CCTTACCGCA
ACCCGTTGTT ACAAAGAGGC CATGAGTCCG GCCGCTGCCT TTAAAGTACT TCTGAGTCTG
ACGCCATCTC ATCTGGATCG AGCCTTGGTT TATGAGTTTA TTCGTTGTGT TGGAGTCTAC
CCGGTAGGCT CATTAGTTGA GTTATCCGAT GGCCGGATTG GTATCGTTTG GCAAGCGAGT
AACCGAGACG CCCTGCATCC GATACTCAAA TGTTTCTACT CAATAAAGCA TAAGCGTTAC
ACCGAAGTCG CTATGGTCGA TCTGCTTAAA TCGGATCTGC ATATTGAGCG TGGTGTCTCA
CCAAGTAGCT TGGATGTCGA TCCATCTCCC TTCTATTGA
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| Protein sequence | MADSVESKAL VKFPVSKLTV GMFVTAIDRQ GLVKISNAGQ IRHRDAIAKL VKNGIKHVWV
DAERSAEHCG LKRAPSPKPV GKKPQQSREK SQKQAKKLIV EAKDLVKKVL SETFEGKAIE
VAPFGALADN MIESALLDAD ALKCVSALRT KDAYLLEHSI NVAFLLVTFG KYLKLEKDTL
RQMAIGGMLH DIGKIKVDDK VLNKPGRLTP EEFEHIKLHQ VFAIDIMKET KGLSSISKDV
CLMHHEKLDG NGYPKGLKGD ELPLHGRMSC IVDIFDALTA TRCYKEAMSP AAAFKVLLSL
TPSHLDRALV YEFIRCVGVY PVGSLVELSD GRIGIVWQAS NRDALHPILK CFYSIKHKRY
TEVAMVDLLK SDLHIERGVS PSSLDVDPSP FY
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