| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0124 |
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| Symbol | |
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| ID | 5612309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 137397 |
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| End bp | 138209 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930950 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001471865 |
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| Protein GI | 157373265 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2998] ABC-type tungstate transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACC TTAAATCTAT CTTCAGCTTT GCATTAGCCG CGACGCTAGT CACAGGTATG
CCGGCACAAG CCGAAGAGAT TATAAAGTTA GCCACAACAA CAAGTACTGA GAACTCAGGC
TTATTGAAAA ACTTATTACC CAAGTTTGAA GCCGAAAGCG GCTACAAAGT TCAGGTCATT
GCAACCGGTA CCGGTAAGGC CCTCAAGCTT GCCCGTCAAG GCGATGTCGA CGTCATCATG
ACACATGCCC CTGCAGCAGA AGCTAAATTT GTAGATGAAG GTTTCGGTCT TTTGCCTCGC
GGCATAATGG AAAACGATTT TGTGATCTTG GGCCCTAAAA ATGACCCGGC TAAGATCCGT
AACAGTAAGA CAGTTGAAGA GGCATTTGCT AAAATAGCCG AATCAGGCGC CATTTTTGTT
TCTCGTGGAG ACAACTCCGG CACAAACATG AAAGAGATGA TCATCTGGAA CAATGCTAAG
GTCGATGCCT CTTTTGCCGG TTATAAGTCT GTTGGTCAGG GAATGGGTAA AACCCTATTG
ATGGCAAACG AACTTCAAGG TTACACACTT TCTGATCGTG GTACCTTCGT GGCCTACAAG
GCAAAGCTGG ATATGGCTAT CGATTTTGAT GGCGGCCAGG CATTAGCAAA CCCATACCAG
ATCATGTTAA TTAACCCTGC AAAATACCCT GATCTAAACC ACAAAGGCGC CAGAGCCTTT
AGTGACTGGT TGATTGGCGC CGAAGCTCAA GGCATGATCA ATAGTTATAA AGTTCAAGGT
GAGCAACTAT TTAAGGCAAC TTATAGCGAA TGA
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| Protein sequence | MLNLKSIFSF ALAATLVTGM PAQAEEIIKL ATTTSTENSG LLKNLLPKFE AESGYKVQVI
ATGTGKALKL ARQGDVDVIM THAPAAEAKF VDEGFGLLPR GIMENDFVIL GPKNDPAKIR
NSKTVEEAFA KIAESGAIFV SRGDNSGTNM KEMIIWNNAK VDASFAGYKS VGQGMGKTLL
MANELQGYTL SDRGTFVAYK AKLDMAIDFD GGQALANPYQ IMLINPAKYP DLNHKGARAF
SDWLIGAEAQ GMINSYKVQG EQLFKATYSE
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