Gene Ssed_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0121 
Symbol 
ID5612443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp135299 
End bp135889 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content46% 
IMG OID640930947 
Productmolybdopterin-guanine dinucleotide biosynthesis protein A 
Protein accessionYP_001471862 
Protein GI157373262 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A 
TIGRFAM ID[TIGR02665] molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.848452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGC AAATTGATGC AGTTATTTTA GCCGGAGGCA TGGCCAGGCG CATGGGGGGA 
AATGACAAAG GTTTAGTCGA ACTCCAGGCA CAACCTATGA TAAAACACGC CATAGATCGC
ATAAAACCAC AAGTTAGAGA GATCCTGATC AACGCAAACC GTAACCAAAC CCGTTATGCT
GAGTTCGGCT ATCAAGTTAT CAGTGACGAA GATTCTGGTT ATCTTGGGCC GCTAGCAGGA
ATGATCACTG CGATGGGGCA AACACAGGCC AAGTATCTTC TTGTCGTTCC TTGTGATTGT
CCGCTTTTGC CGGCTGACCT TGTCGAGCGC ATGCTCTCCC AATTAGAGAA AGAAAATGCC
GACCTTGCAG TAGCAAGTGA CGGGAAGCGC GAACAACCTG TAGTACTACT TTTAAAGCCG
GAATTAAGAG ACTCGATGAA AGCCTTCTTA GATGCTGGCG AACGTAAAAT CGACTTTTGG
TACGCTAAAC ATAACTGCGC CGTAGCTGAC TTTTCAGATC AGCCGAACGC CTTTGTTAAT
GTGAATACGC CAGAACAAAA ACAACAACTT TCTGAGGCAA TTGCCAAATA A
 
Protein sequence
MSLQIDAVIL AGGMARRMGG NDKGLVELQA QPMIKHAIDR IKPQVREILI NANRNQTRYA 
EFGYQVISDE DSGYLGPLAG MITAMGQTQA KYLLVVPCDC PLLPADLVER MLSQLEKENA
DLAVASDGKR EQPVVLLLKP ELRDSMKAFL DAGERKIDFW YAKHNCAVAD FSDQPNAFVN
VNTPEQKQQL SEAIAK