Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0121 |
Symbol | |
ID | 5612443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 135299 |
End bp | 135889 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640930947 |
Product | molybdopterin-guanine dinucleotide biosynthesis protein A |
Protein accession | YP_001471862 |
Protein GI | 157373262 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A |
TIGRFAM ID | [TIGR02665] molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.848452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTGC AAATTGATGC AGTTATTTTA GCCGGAGGCA TGGCCAGGCG CATGGGGGGA AATGACAAAG GTTTAGTCGA ACTCCAGGCA CAACCTATGA TAAAACACGC CATAGATCGC ATAAAACCAC AAGTTAGAGA GATCCTGATC AACGCAAACC GTAACCAAAC CCGTTATGCT GAGTTCGGCT ATCAAGTTAT CAGTGACGAA GATTCTGGTT ATCTTGGGCC GCTAGCAGGA ATGATCACTG CGATGGGGCA AACACAGGCC AAGTATCTTC TTGTCGTTCC TTGTGATTGT CCGCTTTTGC CGGCTGACCT TGTCGAGCGC ATGCTCTCCC AATTAGAGAA AGAAAATGCC GACCTTGCAG TAGCAAGTGA CGGGAAGCGC GAACAACCTG TAGTACTACT TTTAAAGCCG GAATTAAGAG ACTCGATGAA AGCCTTCTTA GATGCTGGCG AACGTAAAAT CGACTTTTGG TACGCTAAAC ATAACTGCGC CGTAGCTGAC TTTTCAGATC AGCCGAACGC CTTTGTTAAT GTGAATACGC CAGAACAAAA ACAACAACTT TCTGAGGCAA TTGCCAAATA A
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Protein sequence | MSLQIDAVIL AGGMARRMGG NDKGLVELQA QPMIKHAIDR IKPQVREILI NANRNQTRYA EFGYQVISDE DSGYLGPLAG MITAMGQTQA KYLLVVPCDC PLLPADLVER MLSQLEKENA DLAVASDGKR EQPVVLLLKP ELRDSMKAFL DAGERKIDFW YAKHNCAVAD FSDQPNAFVN VNTPEQKQQL SEAIAK
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