| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0119 |
|---|
| Symbol | |
|---|
| ID | 5612420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 132415 |
|---|
| End bp | 133401 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640930945 |
|---|
| Product | molybdenum cofactor biosynthesis protein A |
|---|
| Protein accession | YP_001471860 |
|---|
| Protein GI | 157373260 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2896] Molybdenum cofactor biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR02666] molybdenum cofactor biosynthesis protein A, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0460197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA TCGTCGATAC CTTCGGACGT AAGGTAGAAT ATTTGCGTCT TTCTGTTACT
GACAGATGTG ATTTTCGTTG TGTTTACTGC ATGAGCGAAG ACCCCTGTTT TCTCAATCGT
GAACAAGTCC TCAGCTTAGA GGAGCTGGCC TGGGTGGGTC AGGCATTTAC TGAGCTGGGT
GTAAGAAAAA TTCGCCTCAC CGGCGGCGAA CCTTTGGTAC GCACAGACTG TGACCAACTG
GTCAAACTGC TCGGCGACCT GCCAGGGTTA TCGGAGCTAT CGATGACCAC CAATGGTTCC
CGGCTTACCA AGTTTGCTGA AAAGATGCGT GGCTCGGGTC TTGGCAGGCT CAATATCAGC
CTGGATACAT TAAAACCTGA ACTCTTCACC GAATTGACCC GTAATGGCAA ACTTGAGCGT
GTCATTGAGG GTATCGATGC CGCTAAAGCC GCTGGCTTTA CACGCATCAA GATCAATGCG
GTTATTCTAA GAGGCCAAAA TGATGATGAA GTCCTGGACT TGATCGAATT TTGTCGTGGC
AGAGAGTTGG ACATCGCTTT CATCGAAGAG ATGCCACTCG GCATTATCGA TGAGCGTAAG
AAGAGTCGTC ACTGCAGCAG TGAGGAGGTA AAATCAATTA TCTCAAAGCG GTATGAACTC
AGTGTATCGA ACAAGCGTAC CGGTGGACCC GCGCGTTACT ACACCATGCC GGGTAGCTCT
ATTCATGTGG GCTTCATCTC TCCACACAGC AACAACTTCT GCCATGAATG TAACCGCGTT
CGCGTCACTG TAGAGGGCCG TTTGTTACTC TGTTTAGGTA ACGAACACTC CGTCGATCTA
AAAGCCATCC TCAGAGAATT TCCCGGTGAT ATCGAGAAGT TAAAAACCGC CATTTTAGAT
GCCATCAAGC TTAAACCTAA AGAGCATGTT TTTGGGCCCG AGGGCGATGT GCAGATCTTA
CGCTTTATGA ACGCGACAGG CGGATAG
|
|---|
| Protein sequence | MSLIVDTFGR KVEYLRLSVT DRCDFRCVYC MSEDPCFLNR EQVLSLEELA WVGQAFTELG
VRKIRLTGGE PLVRTDCDQL VKLLGDLPGL SELSMTTNGS RLTKFAEKMR GSGLGRLNIS
LDTLKPELFT ELTRNGKLER VIEGIDAAKA AGFTRIKINA VILRGQNDDE VLDLIEFCRG
RELDIAFIEE MPLGIIDERK KSRHCSSEEV KSIISKRYEL SVSNKRTGGP ARYYTMPGSS
IHVGFISPHS NNFCHECNRV RVTVEGRLLL CLGNEHSVDL KAILREFPGD IEKLKTAILD
AIKLKPKEHV FGPEGDVQIL RFMNATGG
|
|---|
| |