| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0115 |
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| Symbol | coaD |
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| ID | 5612452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 128826 |
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| End bp | 129302 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930941 |
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| Product | phosphopantetheine adenylyltransferase |
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| Protein accession | YP_001471856 |
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| Protein GI | 157373256 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0669] Phosphopantetheine adenylyltransferase |
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| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain
[TIGR01510] pantetheine-phosphate adenylyltransferase, bacterial |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACACTA GAGCCATCTA CCCCGGAACA TTCGACCCAG TCACTAATGG TCATGCCGAT
CTCATCGAGC GGGCGGCTAA GCTATTTAAG CATGTGGTGA TTGGGATTGC TGCCAACCCC
TCTAAGAAGC CTAGATTCAC ATTGGAGGAG CGTGTGGCCT TGCTTCAACT GGTGACGTCA
CACTTAGATA ACGTCGAGGT CGTGGGCTTT AGTGGCTTGC TGGTGGACTT TGCCAAGGAG
CAAAAGGCGA GCGTATTAGT ACGTGGTCTA AGAGCCGTTT CTGACTTCGA GTATGAATTT
CAGCTGGCGA ATATGAACCG CCGTTTAAGC TCAGATCTTG AGAGCGTGTT TTTAACCCCC
GCGGAAGAGA ACTCATTTAT CTCATCGACT CTGGTAAAAG AGGTCGCGCA TCATGGCGGT
GACGTCAGCC AGTTTGTTCA CCCTGAAGTT GCGAAAGCAC TGATGACAAA CGTTTGA
|
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| Protein sequence | MHTRAIYPGT FDPVTNGHAD LIERAAKLFK HVVIGIAANP SKKPRFTLEE RVALLQLVTS
HLDNVEVVGF SGLLVDFAKE QKASVLVRGL RAVSDFEYEF QLANMNRRLS SDLESVFLTP
AEENSFISST LVKEVAHHGG DVSQFVHPEV AKALMTNV
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