| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0114 |
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| Symbol | |
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| ID | 5612451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 127714 |
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| End bp | 128772 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640930940 |
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| Product | CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase |
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| Protein accession | YP_001471855 |
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| Protein GI | 157373255 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1887] Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCTGTT TTGATGTTTT ACATCCCTAT TATCTTCCAC AATACTTGCC CGTTAAGGAT
GAGTTAATTA AACGTGGGGA AACAGCACAT TTTATTGTTT ATCGAAATCC TGAGCAGCAA
GCGGCGCTGG ATGCCTTGGT GTCTCAGCAT CAATTGAATG TTCAATGGGT TAATAATGCA
GAGGAAGCGT TGGCTTTTTA TCTGGAAAAT AAGCCTAAGT GGGTTATCTT TGGTAACAGT
TTTGATGCTT CATCAAAACT AAAAGGGATA TCGAAAACAG CGCTGATGCA GCACGGCATC
GGTCCCAAAG CGTGTTATTA CACTGTGTCA GAATCAGATA TGGATGTACG TTTTGTTGAG
GGAGAGTATC GTTTAAACCG ATTACAACAG CTATTCCCCT CAAAAACATT TATCGATACA
GGATACGCAA AATTAGATCC AATCCTACAA GGCCATGAAA AGGGGCTAGA TCTTAAAGCT
ATCGGTTTAG ATCCTTCTAA ACCTACTTTA CTCTACGCTC CGACTTTTTA CCCTAGTAGT
ATCGAGAAGA TGGCTAAACA GTGGCCTGAG CATTTCGCCG AATACAATAT TTTACTTAAA
CCTCACTATT TTTCTTTGAG TAAAGCGGGT TACAAAAAGC AGAAGCAGCT TCTTGAGTTC
TGGGCTTCAT TCGATAATGT TTATTTAGCT CCAGTCGAAG AAACAAATTT AGTTCCCTTT
ATGGCAAGTG CAGATCTGCT GATTAGTGAT GCCTCATCGG CGCTATTTGA GTTTGCCGCT
CTGGATAAGC CTGTAGTCTG GTGTGATTTT TACCATTTAA GGTGGAGTTA CCGGGGAATA
TTTAAGTTTA GATTTAATAA ACGCATGGAT AATGACTTGT ATCGATATGC GGGCGTTGCG
GCCCATGCTG AAACATATGG AAACTTAAAG GCTGTTGTCG ATGAACAGCT GATAAATCCA
GATTTGTTTG CACCTCAGCG TGCTAAATAT ACTCAAGAGC TAGCCGGCCG GGTTGATGGC
TTAGCCAGCA AGCGGATTGT AAATTATCTT CTTGGTTAG
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| Protein sequence | MICFDVLHPY YLPQYLPVKD ELIKRGETAH FIVYRNPEQQ AALDALVSQH QLNVQWVNNA
EEALAFYLEN KPKWVIFGNS FDASSKLKGI SKTALMQHGI GPKACYYTVS ESDMDVRFVE
GEYRLNRLQQ LFPSKTFIDT GYAKLDPILQ GHEKGLDLKA IGLDPSKPTL LYAPTFYPSS
IEKMAKQWPE HFAEYNILLK PHYFSLSKAG YKKQKQLLEF WASFDNVYLA PVEETNLVPF
MASADLLISD ASSALFEFAA LDKPVVWCDF YHLRWSYRGI FKFRFNKRMD NDLYRYAGVA
AHAETYGNLK AVVDEQLINP DLFAPQRAKY TQELAGRVDG LASKRIVNYL LG
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