| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0094 |
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| Symbol | |
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| ID | 5613078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 104402 |
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| End bp | 105022 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930920 |
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| Product | cytochrome c, class I |
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| Protein accession | YP_001471835 |
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| Protein GI | 157373235 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2863] Cytochrome c553 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00310871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000781089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAAAAGT TAGCTCTTGC GCTATCAGTT TTAGCCTCAA TCTCTACTCC TGCGGTAGCA
GAAGGAGATG CTGAAGCTGG AAAAACTAAA GCCATTGTTT GTTCAGCCTG TCACGGTGTT
GATGGTAACA GCCTGATAGA CATGTATCCG AAACTTGCAG GCCAGCAAGC TACATACCTC
AAGAAACAGC TACACGATTT TCGTAGCGCA GCTCAAACAG GCGGAAAAGA GGGACGTAAC
GACCCAATAA TGGGTGGCAT GGCAATGATG CTGAACGATC AGGATATCGA AGATGTCGCA
GCATTTTATG CCTCACAGAC ATTAGCCGTT ACTGAAGTCC AAAATATTCC GGCCTCTGGT
GAGCAGCTAT ATAAAGGTGG TGACATGGTT CGTGGCATTA CCGCCTGTAT CGCCTGTCAT
GGTCCAGATG GTAGTGGTTC TGAGCTGGCT GGTTTCCCTG CGATTGGTGG TCAACACGCA
AACTACCTAA AAATACAACT CAATAAGTTC CATGATGCAA ATCGTAACAA TGATATTAAT
GGCATGATGC AAGATATCTC CGGCAAGCTG ACAAGCGAAG ATGTAGAAGC ATTATCTCAA
TATATATCAA GCCTTAAGTA A
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| Protein sequence | MKKLALALSV LASISTPAVA EGDAEAGKTK AIVCSACHGV DGNSLIDMYP KLAGQQATYL
KKQLHDFRSA AQTGGKEGRN DPIMGGMAMM LNDQDIEDVA AFYASQTLAV TEVQNIPASG
EQLYKGGDMV RGITACIACH GPDGSGSELA GFPAIGGQHA NYLKIQLNKF HDANRNNDIN
GMMQDISGKL TSEDVEALSQ YISSLK
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