| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0093 |
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| Symbol | |
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| ID | 5613309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 102991 |
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| End bp | 103689 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930919 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471834 |
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| Protein GI | 157373234 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0397586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000860939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGTGAACC GATCTATTAC AATGCGTAGA TGCCCCCTGT GCCACAATCA ACACTCCTCT
GTGTTTCACC AAGATAGAAA ACGCAATATG TATCTCTGCG ACCGGTGTCA ACTCGTCTTC
TCCGATGCCA ACTCACATCT CCCTCCCCCG GTAGAAAAGC GCAGATATCA ACAACAGGTC
GCAAAGAATC AAAAACCTTT AAAGCAGTTC TTGATGAGTT TGATACTTCA ATGTGAACAG
CAGAGCACAG ATCCGCTGAT TGGCCTGAAC TTCGGAAGAG TTGCCGAGCC TGACACGGTT
TTGAGTGTAG AGTCTCATCG GCACACCCTA TATCAATATG ATCCATATTT TGCAGCCAAC
CATGACCTGC TCAAGCGCCA ATATGACTTT ATATGTTGCT ACCGGGTTTT TGAACATTTT
CGCTTTCCAT TTAAAGAATG GTCTTTGCTC GGCAAGCTAC TGAAGCCAGG GGCCTGGTTA
GCCATCAGTA CCAAGTTACT CACCGAATTG AGTGCATTTG ACAGATGGCA CCACAAGAAT
AACCTGACCC ATGTTAGCTT TTATCAGCAC TCAACCTTCG AGTTTCTAGC CCAACAGGCA
GGTTTTAAGC TATTATTCGC AGCAAATGAT CTCATTCTGG TGCAAAAACC ATCAGGATCT
GATATAAAAC GCGACCAAAG TTCGCTTGAT GATGTTTAA
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| Protein sequence | MVNRSITMRR CPLCHNQHSS VFHQDRKRNM YLCDRCQLVF SDANSHLPPP VEKRRYQQQV
AKNQKPLKQF LMSLILQCEQ QSTDPLIGLN FGRVAEPDTV LSVESHRHTL YQYDPYFAAN
HDLLKRQYDF ICCYRVFEHF RFPFKEWSLL GKLLKPGAWL AISTKLLTEL SAFDRWHHKN
NLTHVSFYQH STFEFLAQQA GFKLLFAAND LILVQKPSGS DIKRDQSSLD DV
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