| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0092 |
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| Symbol | |
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| ID | 5613308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 102406 |
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| End bp | 102942 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930918 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471833 |
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| Protein GI | 157373233 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3078] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0634394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000108665 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCACACT CTAAAAAATC GCGTAAAACC GATCAAAATG CACCAAAGTT AGCACCAAGA
TCCAAAAAGA ATGAACGCGT TCTGGCTGGC AAAAAGAAAG AGACTGGAAA TAAAGCTGGA
AGCCGGCACA ACTCAAATCT GGTCGGTGGC ACTCAAGGCT CTGCAGCACA GAAAAAAGAT
CCACGTCATG GCAGCAAAAC CGCGGTCAAA CTCGATCTTC CAGGTCAAAC CATCGCGCCG
AAGAAAGAGA AAGGTCCAAA GCTGACCGAT GAACAACGTC TGTTTAAGTT AGAGGAAGAT
CCAAGACTAA ACCAACTTCT GGATATGCTG GAAGAGGGGA AAGACTTAAA CGAAGAAGAT
CAGAAGTGGC TTAACAAGCA ACTCAATACT ATCGAATCAC TCATGGAACG TTTAGGGATC
ACCGAGCAAG ATGATCTTGA CCATGCCATG AAGTCGGCAG TAGCCAGCAG CGATGATGAC
CTTCTCGATA AGTTCGAATC GGGTGCCGAT CTGCTTAAAG ATTACCAAGA TAAGTAA
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| Protein sequence | MAHSKKSRKT DQNAPKLAPR SKKNERVLAG KKKETGNKAG SRHNSNLVGG TQGSAAQKKD
PRHGSKTAVK LDLPGQTIAP KKEKGPKLTD EQRLFKLEED PRLNQLLDML EEGKDLNEED
QKWLNKQLNT IESLMERLGI TEQDDLDHAM KSAVASSDDD LLDKFESGAD LLKDYQDK
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