| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0083 |
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| Symbol | fliP |
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| ID | 5613250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 91494 |
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| End bp | 92222 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640930909 |
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| Product | flagellar biosynthesis protein FliP |
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| Protein accession | YP_001471824 |
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| Protein GI | 157373224 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
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| TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTCGAG CACTGTTGCT TCTCTTTTGC TTACTGGCAC CGAGTGCATT TGCAAATGAT
GGTTTTACGC TATTTACCTT AGATGATGGC CAGCAAAGTC AATCGGTCAA CATCAAGCTA
GAGATCCTGG CCCTGATGAC AGTGCTGAGT TTTCTACCCG CACTGTTAAT GATGCTGACC
AGTTTTACCC GCATCATTGT GGTGCTGGCT ATTTTGCGGC AGGCACTGGG TCTGCAACAG
AGTCCGCCTA ACAAGGTGTT ACTCGGCATC GCTTTAGTGC TCACCCTATT CGTGATGAGA
CCTGTGGGTC AGGTTATGTA TGATGAGGCT TATCTGCCCT ATGATCAGGG GCTGATAGAG
TTACCCGAGG CGGTCAATAT TGGTGTCGTA CCTTTGCGTA AGTTTATGTT GGCGCAGACT
CGGGAAACCG ATCTTGAGCA GATGCTAAAA ATCGCAGATG AACCCGTGAC ACTCACGGCC
GATGAGATCC CCTTCTTTGT GCTTATGCCG GCTTTCGTGT TGAGTGAGCT TAAAACCGCC
TTCCAGATTG GTTTCCTCCT GTTCCTTCCT TTTCTTGTTA TCGACTTGGT GGTAGCCAGT
GTGCTGATGT CGATGGGGAT GATGATGCTT TCGCCTCTGA TTATCTCATT GCCTTTTAAG
TTGATGGTGT TCGTCCTGGT GGATGGCTGG TCTATGACGG TCAGTACGTT AGTTGCCAGT
TTTGGATAG
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| Protein sequence | MLRALLLLFC LLAPSAFAND GFTLFTLDDG QQSQSVNIKL EILALMTVLS FLPALLMMLT
SFTRIIVVLA ILRQALGLQQ SPPNKVLLGI ALVLTLFVMR PVGQVMYDEA YLPYDQGLIE
LPEAVNIGVV PLRKFMLAQT RETDLEQMLK IADEPVTLTA DEIPFFVLMP AFVLSELKTA
FQIGFLLFLP FLVIDLVVAS VLMSMGMMML SPLIISLPFK LMVFVLVDGW SMTVSTLVAS
FG
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