| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0074 |
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| Symbol | |
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| ID | 5613956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 81966 |
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| End bp | 83309 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640930900 |
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| Product | FliI/YscN family ATPase |
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| Protein accession | YP_001471815 |
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| Protein GI | 157373215 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
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| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR03496] flagellar protein export ATPase FliI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCATA ACCTACAGCC AAGCGAAAAT ACGATTACCG AGGCACCAGA CTGGCCACGG
GTCCCGGTGG CTCAGGTCTA TGGCAGGTTA ACCCGCGTCA ACGGTCTGCT ACTCGAGGCC
GTGGGATGTC AGCTTGGCAT GGGAGATCGC TGTCATATTG AATGCCGCGA CGGTCGCCTC
ATCGAAGCCG AAGTTGTTGG TTTTAACAGG GAGACACTCT GCCTGATGCC AATTGAGCAC
ACTTCTGGCC TGATGCCGGG CTCCAGAGTT ATGCCACTCG CCGAACAGGT AAAGATCCCC
GTAGGCACTT CGCTTTTAGG GCGCGTACTC GATGGCCTGG GCCAGCCGCT GGATGCGCTT
GGGCCACTTA AGAATTTACA GAGCGTTCCC CTGAGCAATA ACACCACCAA CCCCTTACTT
CGCAAGCCAA TCAGAGAGCC TCTGGATGTG GGGATCCGCG CCATTAACGC CCTACTCCCT
ATAGGTCGAG GCCAGCGACT CGGGCTGTTT GCGGGCTCAG GAGTAGGCAA GAGTGTATTG
CTCGGCATGA TGACCCGCTT TACCGAGGCA GACGTTGTGG TTGTGGGCTT GATAGGTGAA
CGCGGTCGGG AAGTCAGAGA GTTTATCGAA GAATCATTAG GTGAGGAGGG AAGAGAACGT
GCCGTCGTCA TTGCAGCCCC TGCCGATACC ACGCCTCTGA TGCGAATGCG CGCAATGCGT
CTGTGTCACC ACGTCGCCGC CGCATTCAGA GATCAGGGAA AGCAGGTACT ACTGCTTGTT
GACTCACTCA CCCGCTACGC TCAGGCGCAG CGAGAGATCG CCCTGAGTCT CGGTGAGCCA
CCGGCGACCA AAGGCTATCC GCCTTCGGCA TTTGCACAGC TGCCGAGTTT AGTCGAACTC
GCGGGGAACG GACAAGATCC GGTCGGAACT CTTACCGCCT TTTATACCGT ATTGACCGAA
GGCGATGATC AACAAGATCC CATTGCCGAT GCGGCAAGGG CTATCTTGGA TGGTCACCTG
GTATTGAGTC GTAAACTCGC CGAACAGGGA CACTTTCCGG CCATAGATAT CTCGGCATCG
GTCAGCAGAT TGGCCACTCA GGTCGCCGAT CAAACTCAGC TATCTCAAGG CCACCATTTC
AGGCACCTGA ACAGTCGATA TAACGAAGTG AGAGAGTTAC TCCCATTAGG AGGCTATCAG
GCCGGACACG ATCCACAGAT GGACCTGGCC GTAAGAAGCT ACCCCATGAT GGCACAATTT
CTTCAGCAAA ATACCGAAGA AAAGTTCGAC CGACAGCAGA GCCTTGAACA ATTAAGCGAT
CTAGTGGAAC GTACCGGTAA ATAA
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| Protein sequence | MLHNLQPSEN TITEAPDWPR VPVAQVYGRL TRVNGLLLEA VGCQLGMGDR CHIECRDGRL
IEAEVVGFNR ETLCLMPIEH TSGLMPGSRV MPLAEQVKIP VGTSLLGRVL DGLGQPLDAL
GPLKNLQSVP LSNNTTNPLL RKPIREPLDV GIRAINALLP IGRGQRLGLF AGSGVGKSVL
LGMMTRFTEA DVVVVGLIGE RGREVREFIE ESLGEEGRER AVVIAAPADT TPLMRMRAMR
LCHHVAAAFR DQGKQVLLLV DSLTRYAQAQ REIALSLGEP PATKGYPPSA FAQLPSLVEL
AGNGQDPVGT LTAFYTVLTE GDDQQDPIAD AARAILDGHL VLSRKLAEQG HFPAIDISAS
VSRLATQVAD QTQLSQGHHF RHLNSRYNEV RELLPLGGYQ AGHDPQMDLA VRSYPMMAQF
LQQNTEEKFD RQQSLEQLSD LVERTGK
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