| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0067 |
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| Symbol | |
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| ID | 5610627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 78272 |
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| End bp | 78937 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640930893 |
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| Product | flagellar hook capping protein |
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| Protein accession | YP_001471808 |
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| Protein GI | 157373208 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1843] Flagellar hook capping protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAA ACAGTACCAC CAACAGTAGT GGCAACGATA ACACCAGTGA TGTGATGAAC
TCGCCGGGTA ACGATGCGGC GTCCATCAAG AATGAGTTTA TGACCTTGAT GATCGCGCAG
ATCCAAAACC AGGACCCGAC AAACCCTATC GACAGCACCG AGTATGTCAC TCAGTTAGCC
CAATTCTCTC AGGTTGAGAG CTTAGAGCAG ATGCGCCTGA ACCAGTCGAC TCAGATGGTC
ATGATGGAGA ACCTGGGCAT AGTCCAATCG GCGCAGTTGA TCGGTAAAGA TGCCATGGTC
CCGGCTTCCG AGGTGACCTT AGATACAGAA ACCGTTCACG GCAAAGTCTA TACAGGCAAC
GCAGTCGAAG AGCTCAGTAT CGACATCATG GATGAGAGCG GCGAAGTGGT ATCGACCCTG
AAGCTGGGTC CACAGGAGGT CGGTGATATC GAATTTTCCA TAGATCCAGA AGCCCTAGGT
CTTCCGCCGG GCAAATACAG CATAGAAGCC CAGGCCACCT CGGGCGAAGA AACGCTGACC
GCAGATACCT TCATTCAGGC GCCGATTGAG AAGATCCACT TCGTCAGCGC CTCAGGAATG
ATGATGGCCG AGCTTGGCTA CGGCCTGGGC ACGGTATCAG TTCTGGATAT CTCTGAAGTC
TCATAA
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| Protein sequence | MNVNSTTNSS GNDNTSDVMN SPGNDAASIK NEFMTLMIAQ IQNQDPTNPI DSTEYVTQLA
QFSQVESLEQ MRLNQSTQMV MMENLGIVQS AQLIGKDAMV PASEVTLDTE TVHGKVYTGN
AVEELSIDIM DESGEVVSTL KLGPQEVGDI EFSIDPEALG LPPGKYSIEA QATSGEETLT
ADTFIQAPIE KIHFVSASGM MMAELGYGLG TVSVLDISEV S
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