| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0059 |
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| Symbol | |
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| ID | 5610969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 70710 |
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| End bp | 71627 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640930885 |
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| Product | flagellar hook-associated protein 3 |
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| Protein accession | YP_001471800 |
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| Protein GI | 157373200 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | [TIGR02550] flagellar hook-associated protein 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTGTAA GTACTCAAAA CATGTACAGC AGTAACCTCT ACAATCTGCA AAATACCACC
AGCGATCTTG CCCGTCTCAA TGAGATGATG TCGACAGGTA AATCACTCCT TCGCCCGTCA
GACGATCCCA TAGGTTCAGT CAAGGTGATC GGCAGCGAGC GTGATATGGC GGCAACCAAT
CAGTATCTCA AGAATATCGA ATCTCTAAGT ACTAGCTTCG GCCGCGCAGA GAGTAACTTA
TCGAGTATGA CCGAGCTGCA GAGTCGTATG CGTGAAATCA CGGTCGCGGC CAACAACGGC
AGCCTTTCTG CCGAAGACAG GGCAGCCTAC GCCGCAGAGA TGAATGAGCT ACTCGACGCT
CTCACCGACA CCATCAATGC AAAAGATGAG GGGGGTAACT ATCTGTTTTC CGGCAACCTG
ACTGATACCC CGCCCATCTC AATCGATGCC AGCGGTAACT ATATCTATCA GGGAGACGCC
AGCCAACGTG AAGTGCAGGT ATCAAGCTCC TCATGGATGC CTGCCAATGT GACGGCCCAG
GAGTTTATCT TCTCCAATGG CAGCACAGAT ATCCTCAACC AGACAAAAGA GTTTATCGCT
ATGCTGGAAG ACCCCACACT ATCTCCCGGT GATCCGGCAT TCGATAACGT GGCCGAAAGC
ATGCTAACGA CCTTAGATGA CACCTTGACC AGTATCAGTA GTGCCATGAC CGACATAGGC
GGAAAACAAA ACAGCTTAAC TCTGATACAA GGTTCTCACG AAGAGATGGT GCTGTTTAAC
AAGGAGGTCA TAGGCGAAAC AGAAGGACTC GACTACGCCC AGGCAACAGC CGAGTTCAAC
GTCAAGCTCA CCACACTCAA GGTCACCCAG CAAACGTTCG TGCAGGTCAG CCAGCTATCG
CTATTCGGGC AGATGTAA
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| Protein sequence | MRVSTQNMYS SNLYNLQNTT SDLARLNEMM STGKSLLRPS DDPIGSVKVI GSERDMAATN
QYLKNIESLS TSFGRAESNL SSMTELQSRM REITVAANNG SLSAEDRAAY AAEMNELLDA
LTDTINAKDE GGNYLFSGNL TDTPPISIDA SGNYIYQGDA SQREVQVSSS SWMPANVTAQ
EFIFSNGSTD ILNQTKEFIA MLEDPTLSPG DPAFDNVAES MLTTLDDTLT SISSAMTDIG
GKQNSLTLIQ GSHEEMVLFN KEVIGETEGL DYAQATAEFN VKLTTLKVTQ QTFVQVSQLS
LFGQM
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