| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0057 |
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| Symbol | |
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| ID | 5610967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 68291 |
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| End bp | 69085 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640930883 |
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| Product | flagellin domain-containing protein |
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| Protein accession | YP_001471798 |
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| Protein GI | 157373198 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1344] Flagellin and related hook-associated proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATCTG TTCAGACTAA TAATGCATCA AATATCGCAC AAAACTCAGT AAACAAAAGC
AACGACCTAC TTAGCAATGC CATGGAGCGT CTATCTACGG GTCTACGAAT CAACAGCGCG
GCCGACGATG CTGCGGGTCT GCAGATTGCA ACACGTATGA ACGCTAACGT AGTCGGCATG
GAAACGGCTA ACCGTAACGT ATCTGATGCG ACCTCTATGC TACAGACTGC CGACGGCGCA
CTGGATGAAC TTACCACTAT CGCTAACCGC CAGAAAGAGC TGGCGACTCA AGCGGCTAAC
GGCGTGAACT CAACAGAAGA TCTGGCGGCA CTGGATGCTG AATTTCAGGA ACTATCGAAA
GAAGTAACAC GTATCGTTAC TGATACCGAA TACTCAGGTA ACAAGCTGTT TGCAGAGTTA
GAAGCGGGCG TTACCTTCCA GATAGGTGCT TCAAGTGGTG AAACTTTAGA TGTCACCACA
AATGCAATTA CTGCAGTAGC CGGCGACCTT AAAGCGGGCG CGAATGCCGC TATCGATCTT
GTTGATACCT TCATCGACGA AGTTGGTGCT GAACGCTCAA CACTAGGTGC TAACATCAAC
CGCCTGGGTC ACACAGCCTC TAACCTGACT AACGTCACCG AGAATACTAA AGCCGCAGCA
GGCCGCATCA TGGACACTGA CTTTGCTGTT GAAACTGCAA ACATGACCAA GAACCAGTTA
TTGGTTCAAG CTGGTACGAA TATCCTATCA TCAGCCAACC AAAACACTGG TTTAGTAATG
AGCCTGTTAG GTTAA
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| Protein sequence | MLSVQTNNAS NIAQNSVNKS NDLLSNAMER LSTGLRINSA ADDAAGLQIA TRMNANVVGM
ETANRNVSDA TSMLQTADGA LDELTTIANR QKELATQAAN GVNSTEDLAA LDAEFQELSK
EVTRIVTDTE YSGNKLFAEL EAGVTFQIGA SSGETLDVTT NAITAVAGDL KAGANAAIDL
VDTFIDEVGA ERSTLGANIN RLGHTASNLT NVTENTKAAA GRIMDTDFAV ETANMTKNQL
LVQAGTNILS SANQNTGLVM SLLG
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