Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0052 |
Symbol | |
ID | 5610311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 64214 |
End bp | 64672 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640930878 |
Product | flagellar basal body-associated protein FliL |
Protein accession | YP_001471793 |
Protein GI | 157373193 |
COG category | [N] Cell motility |
COG ID | [COG1580] Flagellar basal body-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTTG GTAATAGTAG CGTTAGCAAA AAATTTTCAT TCACGTTTGT TATTCTTTTA TGGAGCGCTG GAATATTTTG GGTCGGATGG CAATCACCAA GCATTATTGG CGGCCCATTT GTGACTCAGG AAAAAGAATC GAATACAGCA AAGTTTTATC CATTAGACCG ATTTGTAATC TCCGTACCAG GAGACAAGTA CCCCCACTAT CTGCTGCTTG AGATGGCACT TAAAAGCAGC TCACCAAATG TAAGTCGTAC TCTGAAGGAA GCCGATCCCC TCGTCAGAAA TTCACTAATG AAGATGTTTT CCCGAAAACA TTTTAACCAG CTCAATGACT CTCATCAGCT CGAAGCGCTC CAAAAAGAGG CGTTGGTCCT GCTTTCAGGG GTACTGTCCG ACAACCATTA CTCCATAGAA CTCGAAGATG TGCTCTTCAC TCGTATGGTT ATTCAGTAA
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Protein sequence | MAFGNSSVSK KFSFTFVILL WSAGIFWVGW QSPSIIGGPF VTQEKESNTA KFYPLDRFVI SVPGDKYPHY LLLEMALKSS SPNVSRTLKE ADPLVRNSLM KMFSRKHFNQ LNDSHQLEAL QKEALVLLSG VLSDNHYSIE LEDVLFTRMV IQ
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