| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0050 |
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| Symbol | |
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| ID | 5612893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 62608 |
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| End bp | 63465 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640930876 |
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| Product | MotA/TolQ/ExbB proton channel |
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| Protein accession | YP_001471791 |
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| Protein GI | 157373191 |
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| COG category | [N] Cell motility |
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| COG ID | [COG1291] Flagellar motor component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT TATTAGGATT ATTAATTATT CTACTATCGG TATTTGGTGG TTATGTTTGG
GCTGGCGGAA ATTTAAGTTC ATTATGGCAA CCTGCTGAAA TATTAATAAT CTTCGGTGCA
GGTGTCGGCT CTCTTATCAT TGCCAATCCT AAAGCGGTAC TTGCCGATAT GTATGCTCAG
TTACGTGAAC TGCTTTCAGT CGAAAAGGAA GATCCTGAAC TCTATCCCCA GCTCTTTGGA
CTAATGGGAA TGTTAATGAG CCAAATCCAG TCACAGGGGC TGAGAGTACT CGATGAGCAC
GTAGAAAAGC CCAGAGAAAG CTCACTCTTT CTCATGTATC CAACGGTACT CGAACATCCC
AATGTGCTGC AATTTTTAAT CGATAATCTA CGACTTCAGT CCATAGGCAA AATATCTCCA
CACGATCTGG AACATATCTT AGAGGAGGAG ATCTACCGAA TAGAGGAAGA CAGGCTAAGA
CCAGCTCACG CCTTAGGCAG GATTGCTGAA GCGATGCCTG GCTTCGGTAT CTTAGCCGCA
GTCATGGGGA TCATCATAAC GATGTCCAAC ATCGATGGAC CTATCACTAT GATAGGGGTG
AAAGTAGCAG CAGCGCTGGT AGGCACCTTT ATCGGAATTT TTGCCTGCTA CTGTCTATTT
GAACCAACAT CTAAGGCCCT GGAGCATTTA GTTGAACGCA AGTCAGCCCA GCTTCGCTGT
GTTGCCGCCA TGCTTACCGC ATTTGCCAAA GGCAAGCCTC CCATGATTGC CATAGACGCC
GGTAGAAAAC AGATCCAAAG CGAAAACCGC CCCACATTTA TCGAGCTTGA ACGTTGGATG
GTGGAGCAAA AGAGCTGA
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| Protein sequence | MSKLLGLLII LLSVFGGYVW AGGNLSSLWQ PAEILIIFGA GVGSLIIANP KAVLADMYAQ
LRELLSVEKE DPELYPQLFG LMGMLMSQIQ SQGLRVLDEH VEKPRESSLF LMYPTVLEHP
NVLQFLIDNL RLQSIGKISP HDLEHILEEE IYRIEEDRLR PAHALGRIAE AMPGFGILAA
VMGIIITMSN IDGPITMIGV KVAAALVGTF IGIFACYCLF EPTSKALEHL VERKSAQLRC
VAAMLTAFAK GKPPMIAIDA GRKQIQSENR PTFIELERWM VEQKS
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