| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0048 |
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| Symbol | |
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| ID | 5612891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 61185 |
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| End bp | 61601 |
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| Gene Length | 417 bp |
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| Protein Length | 138 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640930874 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_001471789 |
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| Protein GI | 157373189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAAT TTGATGAGTT TATTCCCACT GAAAATCATA GACAGCTAAA AGAGGAAAAC
CATGAGAACA GGCAACACGT AAGGTTAAGT TTAAGAAAGA GAGAAAATGA AAACTTAGCA
CTTGCCTGCG ACGGTGTCAC AGTCACCCTG TTACATAAAA ACTGGCTACA GAGCCACAAG
TTGGGTATCG CTAATATCAA AGATATTGGC TTCGGCGGCG TAGGTTTAAT CACGGCTATA
TCTCTGGACA AAGGGCAAGA GGTCTACATA GATATTGATG GATATAGAAT GTTAGTCAAA
ATCAGCCGAA CAAAAACCAT CAATAGTAAA CTTAATTTTC TGGGTGCTCG TTGGATATCG
ACCGATGAAG AAAAGATTAT CTCTATGATC AATAAAATTC AGCCAGCGTT GATTTAA
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| Protein sequence | MSQFDEFIPT ENHRQLKEEN HENRQHVRLS LRKRENENLA LACDGVTVTL LHKNWLQSHK
LGIANIKDIG FGGVGLITAI SLDKGQEVYI DIDGYRMLVK ISRTKTINSK LNFLGARWIS
TDEEKIISMI NKIQPALI
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