Gene Ssed_0047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0047 
Symbol 
ID5612890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp60833 
End bp61006 
Gene Length174 bp 
Protein Length57 aa 
Translation table11 
GC content46% 
IMG OID640930873 
Producthypothetical protein 
Protein accessionYP_001471788 
Protein GI157373188 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA GACACGGTGT ATTAGCTTCA TTTATGCTGA CGGTGTTCAA TCTGATCCTG 
ATGAACCTCT GCTTTCGCCG TGCCAGACGC TCAGGCGACA CTTACCTGCT ATACCCTGTC
ATTGCAGGGG CGCTACTCTC GTTTATCTTG ATGAGTTACT TTTTCTTTTT CTAA
 
Protein sequence
MTFRHGVLAS FMLTVFNLIL MNLCFRRARR SGDTYLLYPV IAGALLSFIL MSYFFFF