| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0041 |
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| Symbol | |
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| ID | 5613697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 47939 |
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| End bp | 48496 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640930864 |
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| Product | SUA5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_001471782 |
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| Protein GI | 157373182 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00240763 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.264838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGAAC AGGCTCCGGA CGAGGTTCAG GAGATTATCG AACAGGGCGG TGTCGTTGCA
TATCCGACTG AAGCCGTCTA TGGGCTAGGC TGTGATCCTG ATAATGATGA AGCAATAACC
AGATTGCTTG CATTAAAAAA GCGCCCCTGG CAGAAAGGAC TTATCTTGGT TGCCAGTGAT
TATCAACAAC TACTCCCCTA TATTGATGAA TCAAGGCTAA CCAATGAGCA GTTAAACAAG
GTCTTTGTTA AGTGGCCTGG ACCATTTACC TTTATCATGC CGATTAAGCC CGGGCTCTCA
AATTTGTTAT GTGGCAGTTT TAACTCTCTT GCGGTTAGAG TGTCTTCCCA CCCAACGATT
CAAGCCATCT GTCAGAGGCT TGGTAAGCCG TTGGTTTCGA CTAGCGCCAA TCATGCCGGC
GAACCACCTG CGATGAGCTG TGAAGAGATC ATTGCCAAAT TTGATGGTGA GATCGATGCA
CTGATATCCG GCTCTCTTGG AGCTGAGCGA AAACCTTCAA CAATCGTCGA TGCGATCAGT
GGCAAAGTGT TACGTTAG
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| Protein sequence | MLEQAPDEVQ EIIEQGGVVA YPTEAVYGLG CDPDNDEAIT RLLALKKRPW QKGLILVASD
YQQLLPYIDE SRLTNEQLNK VFVKWPGPFT FIMPIKPGLS NLLCGSFNSL AVRVSSHPTI
QAICQRLGKP LVSTSANHAG EPPAMSCEEI IAKFDGEIDA LISGSLGAER KPSTIVDAIS
GKVLR
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