| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0032 |
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| Symbol | trkA |
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| ID | 5610104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 38087 |
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| End bp | 39496 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640930855 |
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| Product | potassium transporter peripheral membrane component |
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| Protein accession | YP_001471773 |
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| Protein GI | 157373173 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0670474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTA TCATTTTAGG TGCAGGTCAG GTTGGTGGCA CACTAGCCGA AAACTTAGTC
GGCGAAAATA ATGACATCAC TATCGTCGAT AACGATAGAA GTCGATTACG CTCGCTGCAG
GACAAGTATG ATCTGCGGGT TGTTTTCGGT CATGGTGCTC ATCCAAATGT CTTGAAAGAG
GCTGGCGCCG AAGATGCCGA TATGCTGATT GCCGTCACCA ACAGTGATGA GTGCAACATG
TCAGCCTGTC AGATGGCATA CACGCTTTTC GGGACACCCA CTAAGATTGC CCGGATCCGC
TCCGAGCAAT ACCTTGCCCT AAGGGATAAG TTGTTTATCA ACACCGAAAC CAAAAAAAAT
GATAATAGCC CTCGTGGCGG TTTTATTATT GATGAGCTGA TCGCACCCGA ACAGCTCGTT
ACCGCCTATA TTCGCAGATT GGTCGAGTAC CCCGGTGCCC TTCAGGTCCT GGAGTTTGCC
GAGGGCCGAT TAAGTCTGGT TGCTGTTCGT GCCTATTATG GTGGCCCCCT CGTAGGTAAC
GCACTGGCCG CCCTTCGCGA ACATATGCCT AATATTGATA CCCGGGTAGC AGCCATCTTC
AGGCAGGGGC GCCCCATCAT GCCTCGCGGC ACCACGATTA TTGAAGCCGA TGATGAAGTT
TTCTTCGTCG CCGATAGCCG TCATGTTCGC GCCGTCATGA GTGAGATGCA GAAACTGGAT
AACTCCTATC GTAATATTAT GATAGCGGGC GGCGGTAATA TCGGTTTCGG GCTCGCTCAG
CAGTTACAGC GTAATCACTC GGTAAAACTG ATTGAACATC GACAAGAGCG TGCAGAAGAG
CTGTCTGAAA AACTCGAAAA CACCACTGTT TTTTGTGGTG ATGCCTCCGA TCAAGAGCTA
CTCCTCGAGG AGCATATCGA TCAAACTGAC GTGTTTATTG CGGTAACCAA TGACGATGAA
GCCAATATCA TGGCAGCCCT ACTAGCTAAG CGCATGGGCG CGAAGAAGGT AATGGTGCTA
ATTCAACGCG AAGCTTATGT GGATATCGTT CAGGAAGCTA ATATTGATAT CGCAATATCT
CCACAACAAG CGACGATCTC GGCACTGCTC ACACATATTC GCCAAGGTGA TATCTGTAAT
GTGTACTCAC TCAGGCGCGG CGCAGCCGAA GCTATCGAAG CTATTGCCCA TGGCGACTCA
AAAACATCAA AAGTTGTTGG TAAACAGATA GGCAATATCA AGTTACCCCC CGGCACGACC
ATCGGTGCTA TCGTCCGTGA CGAAGAGGTA TTGATGGCTC ATGATAAGAC AGTCATAGAA
CAAGGCGATC ACGTCATTCT CTTCCTGGTA AACAAAAAGT TTATCGGTGA AGTTGAAAAA
CTGTTCCAAC CAAGTGCTTT CTTCTTCTAG
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| Protein sequence | MKIIILGAGQ VGGTLAENLV GENNDITIVD NDRSRLRSLQ DKYDLRVVFG HGAHPNVLKE
AGAEDADMLI AVTNSDECNM SACQMAYTLF GTPTKIARIR SEQYLALRDK LFINTETKKN
DNSPRGGFII DELIAPEQLV TAYIRRLVEY PGALQVLEFA EGRLSLVAVR AYYGGPLVGN
ALAALREHMP NIDTRVAAIF RQGRPIMPRG TTIIEADDEV FFVADSRHVR AVMSEMQKLD
NSYRNIMIAG GGNIGFGLAQ QLQRNHSVKL IEHRQERAEE LSEKLENTTV FCGDASDQEL
LLEEHIDQTD VFIAVTNDDE ANIMAALLAK RMGAKKVMVL IQREAYVDIV QEANIDIAIS
PQQATISALL THIRQGDICN VYSLRRGAAE AIEAIAHGDS KTSKVVGKQI GNIKLPPGTT
IGAIVRDEEV LMAHDKTVIE QGDHVILFLV NKKFIGEVEK LFQPSAFFF
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