Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0020 |
Symbol | |
ID | 5612852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 24870 |
End bp | 25115 |
Gene Length | 246 bp |
Protein Length | 81 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640930843 |
Product | sulfur transfer protein SirA |
Protein accession | YP_001471761 |
Protein GI | 157373161 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0425] Predicted redox protein, regulator of disulfide bond formation |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000878962 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACC CATTTTCAGA AGCACAACAC CAACTCGATG CTCTCGGACT CAGGTGCCCG GAGCCGGTCA TGATGGTTCG TAAATCAGTA CGCAAGATGG CTCAGGGTGA AACACTATTG ATCATCGCCG ATGATCCGGC CACGACTCGT GATATTCCCA GCTTCTGTGA ATTTATGGAC CATAAACTGC TGGCCAGCCA AACAGACTCG ACGCCCTACC AATACCTTAT TCAGAAAGGC TTATAA
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Protein sequence | MSDPFSEAQH QLDALGLRCP EPVMMVRKSV RKMAQGETLL IIADDPATTR DIPSFCEFMD HKLLASQTDS TPYQYLIQKG L
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