| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0019 |
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| Symbol | |
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| ID | 5612851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 24405 |
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| End bp | 24845 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930842 |
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| Product | hypothetical protein |
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| Protein accession | YP_001471760 |
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| Protein GI | 157373160 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000110253 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC TTATAGGTAT CGGGTTTAAA CCAATCAAGC AAGGCCCTAT GACGTTAGTT
GAGTCGGCTA ACGTCACCCA GACTCATGGT GTAGAGCAAG ATTTCTTTGG GCGTCCGGGT
AAACGTCAGA TCACGGTAAT GTCCAAAGAC CAATGGCAAC TTGTTTGCGC CGAGCTCGAT
TCACCGCTTC CCTGGACGAC CCGACGTGCA AACCTGTTGA TCGAAGGACA CTGTTTCTGT
GCCGCAGATC AAGGTAAGTT ATTACGTATT GGCAAGCTGA CACTCGAGAT CACCGGCGAA
ACCGATCCCT GTAAAAAAAT GGAAATAGCG CACGCAGGGC TCGAAGCGGC ACTGACTCCG
GATTGGCGTG GCGGTGTGAC CTGCCGGGTA TTAAACGATG CCATAATCAA TAAAGGCGAT
CTTGTTCAAC TGCTAAGCTA A
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| Protein sequence | MKKLIGIGFK PIKQGPMTLV ESANVTQTHG VEQDFFGRPG KRQITVMSKD QWQLVCAELD
SPLPWTTRRA NLLIEGHCFC AADQGKLLRI GKLTLEITGE TDPCKKMEIA HAGLEAALTP
DWRGGVTCRV LNDAIINKGD LVQLLS
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