| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0011 |
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| Symbol | |
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| ID | 5609754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 12470 |
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| End bp | 13456 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640930834 |
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| Product | UreA amidolyase related protein |
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| Protein accession | YP_001471752 |
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| Protein GI | 157373152 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1984] Allophanate hydrolase subunit 2 |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000028869 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAAA GAAATAGTAT CCAAGTTCTC AAGGCTGGTA TGCACTCTTC GGTACAGGAT
CTCGGCTGCA CAGGCTATCG CCATCTGGGA ATAACTACGG GCGGCGCACT GGATCGGCAC
GCCTTAATAC TCGCAAATAG ACTCCTCGGC AATAGCGATG CATCGGCGGG CATTGAGCTA
ACCTCCGGTA TAGTTGAACT TAAATTTAAC TGCGACACCT GGTTTGTGTT AACCGGAGCG
AACTACCGAA TATCTATTGG CCAACGCGAC ATCTGGTGTA ACTGGCGAAA TAAAATAAGA
GCGGGCGAAA CCCTCACCCT GAGAGGACCA AAATCAGGTA TGCGTGCCTA CCTCGCTCTC
GAGGGCGGGA TTGTGGATGG AATAGAGGGT GAAATACGCG ATGGTAGCCC TGAGACAAAT
AACAAATTAC GACTCAAGTC GGACTCACTC TTAGGTGACA GGTTTTCCGG TGTCTTAGGC
GCTGTGCTTA AGGATGGAGA TAGATTAGCG TTAGGTCAGG CCGGAGCAAT ATCGAAACCA
ATCGGTGCTG TGCAGCGGGG ATATTCGAAT GAGATCCGTG CCCTTCCCGG ACCAGAGATG
CCACTGTTTT CGGAAGAATC AAAAAAGGCC TTCTGGAATA GCTCCTGGCA ACTCACCAAC
GAAAGCAACA GGATGGGAGC CAGACTATCC GGAATAACAT TATCCTTAGC GCAGCAACAA
GATATGGAAT CACACGCCGT CATGCCGGGA GCGGTTCAAG TCCCTCCCGC CGGGCAACCC
ATAGTATTAC TCGCCGACTC ACAAACCACG GGGGGTTATC CTAAAATAGC GACCGTTATT
GAAGCCGATC TCTGGAAGTT AGCCCAAACC AGACCCGGAG AAGAGGTTCG ATTTGTTCAT
GTGAGCCCAA ATCAGGCTGA TGATGCCAAT TACGAGTGGG AAGAGTATTT TTACCGGCTT
CAACGAGCAA TAGAGGCCAA TGGTTAA
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| Protein sequence | MTKRNSIQVL KAGMHSSVQD LGCTGYRHLG ITTGGALDRH ALILANRLLG NSDASAGIEL
TSGIVELKFN CDTWFVLTGA NYRISIGQRD IWCNWRNKIR AGETLTLRGP KSGMRAYLAL
EGGIVDGIEG EIRDGSPETN NKLRLKSDSL LGDRFSGVLG AVLKDGDRLA LGQAGAISKP
IGAVQRGYSN EIRALPGPEM PLFSEESKKA FWNSSWQLTN ESNRMGARLS GITLSLAQQQ
DMESHAVMPG AVQVPPAGQP IVLLADSQTT GGYPKIATVI EADLWKLAQT RPGEEVRFVH
VSPNQADDAN YEWEEYFYRL QRAIEANG
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