| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0006 |
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| Symbol | dnaA |
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| ID | 5610244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 4812 |
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| End bp | 6200 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640930829 |
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| Product | chromosomal replication initiation protein |
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| Protein accession | YP_001471747 |
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| Protein GI | 157373147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000403403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000136332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGCGGTTT CACTTTGGCA GCAATGTATC GGACGACTAC AAGATGAGCT CTCTGCTCAG
CAATTCAGTA TGTGGATTAG ACCGTTACAA GCTCAAATGG ATGGAGATAC ATTAGTTCTC
TATGCTCCAA ACCGTTTCGT TCTCGATTGG GTAAGAGATA AGTACATCAA CATCATCAAT
CAGTTTTTTA CTGAACAGAT GGGAAGTGAT GCACCTAAGT TACGCTTCGA TATCGGGAGT
CGCCCTTCAG CGCCACGACC TGTGCAGGCA ACTGCTGCGG TAGAAAGGCC CAAGTTCGAG
CAAAATACTA AACCGGCTAA GACTTCATTT AATGTCAATT CGCCAGAGCC AGCTATGGCC
GCGAATCACA GAAGCAATAT CAATCGGACT TATCAGTTTG AAAACTTCGT AGAAGGTAAG
TCTAACCAAC TGGGTAAGGC GGCTGCGATG CAAGTGGCTG AAAATCCGGG TGGCGCTTAT
AATCCACTCT TCTTGTATGG TGGTACCGGT TTAGGTAAGA CCCATCTGTT ACATGCTGTG
GGTAATGGCA TTATAAAGAA CAATCCTAAT GCTAAAGTCG TGTATATGCA TTCTGAGCGC
TTCGTTCAAG ATATGGTTAA GGCATTACAG AATAACGCGA TCGAAGAATT CAAACGTTAC
TACCGTAGCG TCGATGCTTT ATTTATCGAT GATATTCAAT TCTTTGCTAA CAAAGACAGA
TCCCAGGAAG AATTTTTCCA TACCTTTAAT GCACTATTGG AAGGTAATCA TCAGATCATC
TTAACGTCGG ACAAATATCC TAAAGAGATC GACGGCGTTG AAGACAGACT TAAATCTCGC
TTCGGTTGGG GCCTTACGGT TGCGATCGAG CCGCCAGAGT TAGAGACCCG AGTGGCTATT
TTGATGCGTA AGGCTCAGGA GAGCGGCATT AATCTGCCCG ATGAAGTGGC CTTCTTTATT
GCCAAGCGTT TACGTTCTAA CGTTCGAGAG CTTGAAGGTG CATTGAATCG TGTTATTGCG
AACGCTAACT TTACCGGACG TCCGATTACT ATCGACTTTG TGCGTGAAGC CTTAAGAGAC
CTCTTGGCAC TGCAGGAAAA ATTGGTCACT ATAGATAACA TTCAGAAAAC CGTCGCTGAA
TATTACAAGA TCAAGATGGC TGACATGCTT TCTAAGCGTC GTTCGCGTAG TGTTGCCAGA
CCACGCCAGG TGGCTATGGC ACTTTCTAAA GAGTTAACCA ACCATAGTTT GCCCGAAATA
GGGGATGCCT TTGGTGGCCG AGACCATACA ACTGTTCTGC ACGCTTGTCG TAAAATTGCA
CAGTTGAGAG AAGAAAGTCA TGACACGAAA GAAGATTATG CTAACTTGAT CCGTACGCTA
TCTTCATAA
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| Protein sequence | MAVSLWQQCI GRLQDELSAQ QFSMWIRPLQ AQMDGDTLVL YAPNRFVLDW VRDKYINIIN
QFFTEQMGSD APKLRFDIGS RPSAPRPVQA TAAVERPKFE QNTKPAKTSF NVNSPEPAMA
ANHRSNINRT YQFENFVEGK SNQLGKAAAM QVAENPGGAY NPLFLYGGTG LGKTHLLHAV
GNGIIKNNPN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALFID DIQFFANKDR
SQEEFFHTFN ALLEGNHQII LTSDKYPKEI DGVEDRLKSR FGWGLTVAIE PPELETRVAI
LMRKAQESGI NLPDEVAFFI AKRLRSNVRE LEGALNRVIA NANFTGRPIT IDFVREALRD
LLALQEKLVT IDNIQKTVAE YYKIKMADML SKRRSRSVAR PRQVAMALSK ELTNHSLPEI
GDAFGGRDHT TVLHACRKIA QLREESHDTK EDYANLIRTL SS
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