Gene Ssed_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0005 
SymbolrpmH 
ID5610243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp4230 
End bp4367 
Gene Length138 bp 
Protein Length45 aa 
Translation table11 
GC content51% 
IMG OID640930828 
Product50S ribosomal protein L34 
Protein accessionYP_001471746 
Protein GI157373146 
COG category 
COG ID 
TIGRFAM ID[TIGR01030] ribosomal protein L34, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000407109 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000598342 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTAAAC GTACTTTTCA ACCAAGCAAC CTAAAGCGTA AGCGTTCTCA CGGATTCCGC 
GCTCGTATGG CTACAGTTGG AGGCCGCAAG GTCCTAGCTC GTCGTCGTGC TAAAGGTCGC
GCTCGTCTTT CTGCTTAA
 
Protein sequence
MSKRTFQPSN LKRKRSHGFR ARMATVGGRK VLARRRAKGR ARLSA