| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Krad_4589 |
|---|
| Symbol | |
|---|
| ID | 5601016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kineococcus radiotolerans SRS30216 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009806 |
|---|
| Strand | + |
|---|
| Start bp | 73260 |
|---|
| End bp | 75863 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640930664 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001468172 |
|---|
| Protein GI | 157283904 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 62 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGC ACACCACTCG CCCAACCCCA GGCGGTGACG TCGCCGCCGC TGCCTCTACC
GCCGCTGCTT CCGCCGGTGC TGCCTCTACT GACGGGACCC TCGGCGCTAC CTCAGCTACG
CAGCAGCCCA CGCCGAAGCC CATGCAACGT CAACAGCCCA AGCAGCCGGT GGCCGAGGTG
ACGCCCCTGC AGGTGGTGGA ACTCAACATC AGCGGCATGA CGTGCGCCTC GTGCGCAGCG
CGTATCGAGA AGAAGCTCAA CAAGATGCCC GGGGTCGAGG CCAGCGTGAA CTACGCCACC
GAGAAAGCAC GGGTCGCCCT GCCCGCCGGT ACCGACGTCG AAGCCGCCAT CAAGGTCGTG
CAGGCCACCG GCTACAGCGC CGCCCTACCG CCGGCTCCCC GCCCCAGCGC AACCCCGACC
CACCTGCGCA GCAACGCTGC ACATGGTGTG GAACATGGTG AGGAAGGTGG CGGCCAGCAC
GGCGAGCAGA ACAGTGGGCA CGACGGTGGG CACGACGGTG GGCACGACGG TGGACAGGAC
GAGGAGCACG GTGCAGGTGA GACACGGGCT CTGCGCCAGC GGCTGCTGAT CTCCCTCGCC
CTCAGCGTGC CGGTGGTGGT GCTGGCCATG GTGCCGGCGC TGCAGTTCAC CTACTGGCAG
TGGCTCTCGC TGACCCTGGC CGCACCGGTG GCGATCTGGG GGGCGTGGCC CTTCCACCGC
GCAGCTGCCC TCAACGCCCG TCACGGCGCG GCCACCATGG ACACCCTCAT CAGCGTCGGG
GTTCTCGCCG CCTTCGCGTG GTCGCTGTAC GCGTTGTTCT TCGGCGGCGC CGGGATGGCC
GGCATGCGGA TGGCGTTCAC GCTGCTGCCT GAGCGGGGCA GCGCCCACGC CGGGGCGGAG
ATCTACCTGG AGGTCGCCGC CGCGGTGACG GTGTTCATCC TCACCGGCCG CTATCTCGAG
GCCCGCGCCA AGCGCAGCTC GGGAGCTGCG CTGCGCGCCC TGCTGCACCT GGGGGCCAAA
GAGGTCACCG TTCTCCGCGA GGGGGCCGAG TCACGCATCG GCATCGAGCA GCTGGGCGTC
GACGACGTCT TCGTGGTGCG GCCCGGGGAG AAGATCGCCA CCGACGGCGT CGTGCTCGAA
GGCTCCTCGG CCATCGACGC CAGCATGCTC ACCGGTGAAT CGGTGCCGGT GGAAGTCGGA
CCCGGCGCCG CCGTCAGCGG AGCCACGGTC AACGCCGGGG GCCGGCTGCT GGTGCGCGCC
ACCCGCATCG GCGCCGACAC GCAGCTGGCG CAGATGGCGC GCCTGGTGCA GGACGCGCAG
TCCGGGAAGG CCGCGGTGCA GCGTCTGGCG GATCGGGTGT CGGGGGTCTT CGTGCCCATC
GTCATCGTGC TAGCCATCGC CACCCTGGCC GGCTGGCTGC TAGCCGGTGC CGGTGCGGAG
GCGGCGTTCA CCGCCGCGGT CGCGGTGCTG ATCATCGCCT GCCCGTGCGC GCTGGGGCTG
GCCACGCCGA CCGCGCTGCT GGTCGGTACC GGGCGCGGGG CGCAGCTGGG GGTGCTCATC
AAGGGCCCGC AGGTGCTGGA GTCCACCCGC CGCATCGACA CCGTGGTGCT GGACAAGACC
GGCACCATCA CCACCGGGCA GATGAGCCTG ACCGGGGTGC ACCCGGCTCC TGGAGTCGAT
GAGACCCAAC TGCTGCGTCT GGCCGGTGCC CTGGAGCACG CCTCGGAGCA CCCCATCGCC
GCCGCCATCA CCACCGGTGC CCGCCAACGC CTGAGCAGCG CAAACGGCAA CGCAGACGGC
AGCGCAAACG GCAGCGCAAA CGGCAGCGTG CAACTGCCCG CGGTGACGTC TTTCGCCTCC
ACCGGCGGCC TCGGGGTCAC CGGTGTCGTC GAAGGGCACG CCGTCATCGC TGGCCGCGCT
TCCTGGCTGG CGCAGCAGTG GTCCCAGCCT CCGCCCGTGG AGCTGTCCGA AGCCGCCGCC
GCCGCGGAAG GCGAGGGACG CACCGCTGTC GCGGTCGGCT GGGACGGGCA GGTTCGTGGG
GTGCTGGTGG TCGCCGACAC CGTCAAGACC TCCAGCGCCG TCGCGGTGGC GCAGATGCGC
GAACTGGGTC TGCGCCCGGT GCTACTGACC GGTGACAACG CCCGCGCCGC CCGCGCGGTC
GCCGAGCAGG TCGGCATCGA CGACGTCATC GCCGAGGTCC TGCCCGCCGG CAAGCTCGAC
GCCATCACCG CCCTGCAGCG TCAAGGTCGG GTGGTGGCGA TGGTCGGTGA TGGCGTCAAC
GACGCCGCCG CCCTGGCCGG TGCTGACCTG GGCATCGCCA TGGGTACCGG CACCGATGTG
GCCATCGAAG CGTCCGACCT GACCCTGGTG CGCGCTGACC TGCTCGCTGT CGTCGACGCG
CTGCGCCTGT CGCGCAGGAC ACTGTCCACC ATCAAGGCCA ACCTGTTCTG GGCCTTCGCC
TACAACCTCG CCGCCCTGCC GCTGGCGATC GCCGGGTTGC TCAACCCCCT GGTGGCCGGT
GCCGCCATGG CCTTGTCCTC GATCTTCGTG GTCACCAACA GCCTGCGCCT GCGCCGCTTC
GCCCCCACCA CCTCCCGCGC CTGA
|
|---|
| Protein sequence | MSEHTTRPTP GGDVAAAAST AAASAGAAST DGTLGATSAT QQPTPKPMQR QQPKQPVAEV
TPLQVVELNI SGMTCASCAA RIEKKLNKMP GVEASVNYAT EKARVALPAG TDVEAAIKVV
QATGYSAALP PAPRPSATPT HLRSNAAHGV EHGEEGGGQH GEQNSGHDGG HDGGHDGGQD
EEHGAGETRA LRQRLLISLA LSVPVVVLAM VPALQFTYWQ WLSLTLAAPV AIWGAWPFHR
AAALNARHGA ATMDTLISVG VLAAFAWSLY ALFFGGAGMA GMRMAFTLLP ERGSAHAGAE
IYLEVAAAVT VFILTGRYLE ARAKRSSGAA LRALLHLGAK EVTVLREGAE SRIGIEQLGV
DDVFVVRPGE KIATDGVVLE GSSAIDASML TGESVPVEVG PGAAVSGATV NAGGRLLVRA
TRIGADTQLA QMARLVQDAQ SGKAAVQRLA DRVSGVFVPI VIVLAIATLA GWLLAGAGAE
AAFTAAVAVL IIACPCALGL ATPTALLVGT GRGAQLGVLI KGPQVLESTR RIDTVVLDKT
GTITTGQMSL TGVHPAPGVD ETQLLRLAGA LEHASEHPIA AAITTGARQR LSSANGNADG
SANGSANGSV QLPAVTSFAS TGGLGVTGVV EGHAVIAGRA SWLAQQWSQP PPVELSEAAA
AAEGEGRTAV AVGWDGQVRG VLVVADTVKT SSAVAVAQMR ELGLRPVLLT GDNARAARAV
AEQVGIDDVI AEVLPAGKLD AITALQRQGR VVAMVGDGVN DAAALAGADL GIAMGTGTDV
AIEASDLTLV RADLLAVVDA LRLSRRTLST IKANLFWAFA YNLAALPLAI AGLLNPLVAG
AAMALSSIFV VTNSLRLRRF APTTSRA
|
|---|
| |