Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Krad_4560 |
Symbol | |
ID | 5600987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kineococcus radiotolerans SRS30216 |
Kingdom | Bacteria |
Replicon accession | NC_009806 |
Strand | - |
Start bp | 47190 |
End bp | 48899 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640930635 |
Product | ResB family protein |
Protein accession | YP_001468143 |
Protein GI | 157283875 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1333] ResB protein required for cytochrome c biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 0.601047 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 82 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCACG ACTACTACGT GGAAGACCGC CTCGAGGGTG AGGCTGATGG GGCGGTCCCG ACCAAACGCA GCCCGGGTTC GCTCACGGGC CTCGAACTGC TGCGTTTTTC CTGGCGGCAG CTGACGAGCA TGCGTACCGC GTTGTTCCTG CTGATGCTGC TGGCCATCGC CTCCGTTCCT GGTTCGCTAT TCCCGCAGGC AGGGTTCGAC GCGGCGGGCG TGGCGCGTTT CCTGCGCGAC AACCCCGAGG TGGGCCCTTG GCTGCAGCGT CTGCAGTTCT TCCAGGTGTA CTCATCGGTC TGGTTTTCTG CCATCTACCT GCTGCTGTTC ATCTCCCTGG TTGGCTGCAT CGTGCCGCGC GCCCTGGTCC ATGCAAGGGC TATACGGTCC CGCCCACCAC GCACCCCGGC CCGGTTCACT CGGCTTCCTG AGTTCCGGCG CCTGCAGCCA ACTGCGCCGC CGGCGGTCAT CCTGCAGGTA GCGGCCGGGT ACCTAAGACG GCGCCGGTTC CGCGTCGACG TGCGCCTGGA CCAGGACGGG GTAGCCTCGG TGGCTGCAGA GCGGGGGCAT CACCGCGAAA GCGGCAACGT GCTCTTCCAC GTCAGCCTGG TCGGACTGCT CGTCTGCTTC GCCACCAGCT CGCTGTACTC CTTCTCTGGT CAGCGCGTGG TGGTTGAAGG TCAAAGTTTC GTCGGTGCGG CCACCGATTT CGATAGTTTC ACTGCTGGGG CGGGATCCGA TGAGAGCGGC ATTCCACCGT TCAGCTTGAA GTTGCAGAAC ATGGATGTGA GCTTCGAAGC ACAGCAAAGC TCACAGATTG GCCAGCCACG GCAGTTCGCG GCTGATGTTC TGCTCTCCGT GGGCGCGGAA GCAGAGCAAC CGCGTCGCAT CGAAGTCAAC AAGCCCGCCG ACGTCGTAGG TACACAGATT TCACTGTCCG GCAACGGGTA CGCCCCAGTG CTGACGGTTC GTGACGGGAG CGGGTCGGTT GTCTCAGCAG GCGCCGTCCC GTTCCTGCCG CAGACGGGTA ATTACGACTC CAGCGGTGTG GTGAAGATCC CGGACGCGGT TGATGCCGAC GGCCGTCCGG CCCAGTTCGG ACTGCAGGGA GTCTTCCTGC CCACCGCCAC CGTGGATGGG GCCGGCCGTC CGGTGTCCGG GTTTCCTGGG CTCGGGAACC CCTTCCTCGT TTTTACCCTC TGGGTCGGTG ACCTCGGCCT GGAGTCCGGC CTGCCGCAGA GCGTGTACGA GCTGGACAAC ACCGCGATGA CTCAAGTGCT GGATGGGCAG GGCCGGCCGC TGGCGCTGCA GCTGACACCG GGGCAGACCG TTCAACTGCC CGAGGGTCTG GGAAGCGTCA CCCTGGAAAG CGTTGCACGC TTTGCTGCAT TCGACATCCG GCGTACCCCC GGGCAGCTGC CAGCGCTGGT TTTCTCCCTG CTGGCCACTG CAGGGTTGAT TGCCTCACTC TTCCTCCCTC GGCGCCGCGT GTGGGTGCGG GTACCCGGTA GCCAGGAAGC AGCGGAGCAG GGGTTGGAGA TCGCCGGACT GTCTCGCGGT GCGGACGCCG GGCTGGCCGC GGAGGTCGAC AGCTTGCTCA GCGCGCTCGT CCAGGCGGGG GTTGCGGAAG CATCAACGCA GACGGAGGGG CAGGCGGACG GGCGGGCGGA CGGGCGGGCG GACGGGCGGG CAGGAGGCGT GGTGGGGTGA
|
Protein sequence | MSHDYYVEDR LEGEADGAVP TKRSPGSLTG LELLRFSWRQ LTSMRTALFL LMLLAIASVP GSLFPQAGFD AAGVARFLRD NPEVGPWLQR LQFFQVYSSV WFSAIYLLLF ISLVGCIVPR ALVHARAIRS RPPRTPARFT RLPEFRRLQP TAPPAVILQV AAGYLRRRRF RVDVRLDQDG VASVAAERGH HRESGNVLFH VSLVGLLVCF ATSSLYSFSG QRVVVEGQSF VGAATDFDSF TAGAGSDESG IPPFSLKLQN MDVSFEAQQS SQIGQPRQFA ADVLLSVGAE AEQPRRIEVN KPADVVGTQI SLSGNGYAPV LTVRDGSGSV VSAGAVPFLP QTGNYDSSGV VKIPDAVDAD GRPAQFGLQG VFLPTATVDG AGRPVSGFPG LGNPFLVFTL WVGDLGLESG LPQSVYELDN TAMTQVLDGQ GRPLALQLTP GQTVQLPEGL GSVTLESVAR FAAFDIRRTP GQLPALVFSL LATAGLIASL FLPRRRVWVR VPGSQEAAEQ GLEIAGLSRG ADAGLAAEVD SLLSALVQAG VAEASTQTEG QADGRADGRA DGRAGGVVG
|
| |