Gene Krad_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_4540 
Symbol 
ID5600967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009806 
Strand
Start bp25645 
End bp26376 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content67% 
IMG OID640930615 
Productsignal peptidase I 
Protein accessionYP_001468123 
Protein GI157283855 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.0613872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.498524 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGATC GCGACTCAGG TGAGGAAGCG GGGGCTGCTG TGGAAGCGGG GGCTGCTGCG 
GAAGCGGCAC TGCACAAGCG GCTCCCCACC CTTGGTGTCT TTGCGGTCCT CAAGGGGACC
ATCCTGATGA TCGCCGCCGT CCTGGTCCTC TCGGTCGTCG TGGAGAGGTT CCTCGTCGGC
TCTTTCCACA TCCCGTCACA GTCGATGGAG CCTGCTCTGC ACATCGGTGA TCGCCTCGTG
GTCAGCAAGC TGACGCCGGG GCCGTTCGAG CTGGACCGCG GTGACGTCGT CGTCTTCTCC
GACCCCGGTG GCTGGCTCAA AGAGAGCGCG GCGCCGCAGC GCGGCCCCGC CAACGCGATG
GCCGTGGGGG CGCCGAGCCT GGCCGGGCAG TCGCCGCAGG GATCCACCGC CAACATCGTC
AAGCGGGTCA TCGGACTGCC AGGCGACCGC GTCGTGTGCT GCGACGCGCA GGACAGGCTC
ACCGTCAACG GCCGCGCCCT CGACGAGACG GCCTATTTGC CCCGTGGGGT GAAGCCCAGT
GAGACAGCTT TCGCTGTGAC CGTGCCCAGG GGAGAGTTGT GGGTAATGGG CGACAACCGG
ATCCGATCCA ACGATTCTCG TTACCATCCC AATGCGGTAC ATGGTGGGTT CGTGCCGGTC
GACCTGGTCG TCGGGCGAGC GAGTGCCGTC GTCTGGCCGC TCTCGCACTG GTCGCGGCTG
AGCGCTCCTT AG
 
Protein sequence
MRDRDSGEEA GAAVEAGAAA EAALHKRLPT LGVFAVLKGT ILMIAAVLVL SVVVERFLVG 
SFHIPSQSME PALHIGDRLV VSKLTPGPFE LDRGDVVVFS DPGGWLKESA APQRGPANAM
AVGAPSLAGQ SPQGSTANIV KRVIGLPGDR VVCCDAQDRL TVNGRALDET AYLPRGVKPS
ETAFAVTVPR GELWVMGDNR IRSNDSRYHP NAVHGGFVPV DLVVGRASAV VWPLSHWSRL
SAP