Gene Krad_4539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKrad_4539 
Symbol 
ID5600966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKineococcus radiotolerans SRS30216 
KingdomBacteria 
Replicon accessionNC_009806 
Strand
Start bp22710 
End bp25400 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content73% 
IMG OID640930614 
Producthypothetical protein 
Protein accessionYP_001468122 
Protein GI157283854 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.574606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.530229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGCGA GCCGATGGAT CTCATTCGGC ATCAGCCGTC CACCGCCTGC CCCCCGCTTC 
AAGGAGGAGC GCAGAAGTGC CGACTCCTGG TCGGTGAGCT CCTCGCCCCG GTCCTCGACC
CGCGCGGCGC GCCGACTGCT CGCCCCCCTG CTCGTGGTGG GCCTGCTCGC CGCTGCCGCG
ACGCTGCTGC ACCAGGCATT CCGCCACTAC GACGCGGCGC GGTTGGGGGA CGACCTGCTG
GCGCTGGGCC CGGGCGTCGT GCTCGCCGCC CTCGGGGCGA CGGCGGTCTC CTACCTGGCG
ATGACCGGCT ACGACGCGCT GGCCCTGCGC TACGTCGGGC ACTCCCTGCC TTACCGCCGC
TACGGGCTCG CCTCGTTCGT CGCCACCGCC TTCGGCAACA ACCTGGGCGC TTCCGCGGTG
GTGGGGGCGG CGTTGCGGGC GCGGGTCTAC TCGGGCTGGC AGGTCCCCGG GTCCGCGATC
ACCCGGATCA TTGGCTTCAA CCTCGTCACC CTGGCGCTGG GTGTCGCGGT CCTGGCCGGC
GGCGGGATGC TGCGCGACCC GGTCCGGGTG GGCGAGGCGC TGCACCTGCC CGGTGCTGCG
GTCCTGGCCC TCGGGTCGCT GCTGTTGGTG TTCGTCGCGG GCTACTTCGT CTGGGCTGGT
GTCGGTGGGC GTGCGATTGG ATGGCGTGGT CGGCGCATCG ACCGCCCTGC TCCCCGCTTG
GCGGTGGCCC AGGTCGTGCT GTCGACGTTC GAGTGGTTGA GCATGGCCGC GGCCTTGTAC
GTCCTGCTGC CTGCCCGGGG GCGGCTCCCG TTCCTGGCCT TCGCTGTCGC CTTTTCGATC
GCGACCCTTG CTGGGCTGGT CAGCAATGTG CCCGGCGGGC TGGGGGTCTT CGAGACGGCG
CTGGTGGTGC TGATCGGGTC GACGACCTCG CCCGCAGGGC TGGCGGTGGC GCTGGTGGCC
TACCGGCTCT GCTACTTCGT GCTGCCGCTG CTCCTGGCGG CGGTGCTCCT CGTCCTGCAT
GAGGCCCGCC GGGGCGTGGC GTCCCCACCG GCGCCCGCGG CGGCGTCCAC GCCCGCGGCG
GCGTCCACGC CAGCGCCCGC GGCGGCACCC ACCGGCCCGA GGTCCCCGGC CCGCCTCCCT
GCCGTCCTCA CGCCCTCGGT GCTTGGGCTG GTCGTCGCCG GCGCCGGCGT GTTCATGCTC
GTGGTGGGGG ACCTGCCGGG CCGGGCACTG GACGTGTCGG CCGTCACCAT CAGCCTCGCC
GGGTTGGGGG CCCTGCTGAT GGCCTGGGGT CTGCACCGGC GCCTGAAGCG GGCGTGGGTG
GGCACCCTCG CGTTGCTCGT CGGTGTCACG GGGATCGCCG CCGCCCACGG TGATCTGGTG
CTGTCCGCGG TGACCGCCGG GCTCGCCCTG CTCTTGCTGC CGGCGCATCC CGTCTTCCCC
CGCGGCACCG TTCTCACCCG CCCGCGGAAC CTGGTCTGGC CGGTCACCGC GGCCGTGCTG
GTCGGGGTGG CTGTGTGGTG GCAGGAGTTC AGCGGCTCCG ACGGGGCGGT GGACGCACCT
TTGCTGGTGG CGTCGATCTC CGGCGACACC TCGGGAGCGG ACCGGTTGGC GATGGTCGCG
GGCGCGGTCG GGGTCGTCAT GGGCGGGCGC CGGATCCTCC GAGCGGTGAA CCCCGGTCCG
CGAGTCCCGT GCGAGGTGGA GATGGCCAAG GTGGCCGGCA TCGTCGCGCG CTCCGGGCGC
TGCACCTCGC ACCTGGCCTT CACCGGCGAC AAGCGCTTCC ACTTCAGCCC CGCCGGCAGG
TCCTTCCTCA TGTACCAGGT CGAGGGCCGC AGCTGGGTCG TCATGGGAGA CCCCGTCGGG
GATCCGGGCG GGGATCAAAG TGACATCCGA GACCTCATCG CCAGCTTCGT CGCCGACGTC
GACCGCCACG GCGGCCGGCC GGTCTTCTAC AACGTGCTCA CCGACCACGC CGACCTGTAC
CGCGAGCACG GCCTCAGCCT GGCCAAGCTG GGGGAGGAGG CCGTGGTCCC CCTCGATGAC
TTCACCCTCA CCGGCAAGGC CAGGGTGAAC CTCCGCAACT GCCGCAACAA GTCCCAGCGT
CTGGGTCTGA GCGTCGACTT CGTCGCGCCG GAGGACGTCG CGCCGCTGCT GCCCGCCCTG
CGCGAGGTGT CCGACGCCTG GCTCACCCAC CGCAACGGCA AGGAGAAGCG GTTCTCCCTG
GGCGCCTTCG ACGAGGAGTA CGTCGCCCGC TTCCCGTTGG CCGTGGTGCG CCACGAGGGC
CGGGTCGTCG CCTTCGCGAC CCTGTGGACC GACGGCGAGG GGCGCGAGGT GCAGGTCGAC
CTCATGCGCC GCCTGCCCGA CGGGCCGCGC ACCGTGATGA CCTACCTGTT CGTCGAGTGC
ATCCTGTGGG CCAGGGAGAA CGGCTTCGCG TCGTTCAGCC TGGGGGTGGC GCCGCTGGCG
GGGCTGCGGG GCGACGCCCG GCCCTCCGCC TGGGACCGGA TGGGGCACCT GCTGTGGACC
CACGGCGAGC GCTTCTACAA CTTCAAGGGC CTGCGCGCGT TCAAGCAGGG CTTTCAGCCC
CGGTGGCGGA CCTGCTACGT CGCCGCCCCC GGCGGCCTGG CCCTACCAAA GGCCATGGTG
GACGTGGCGA CGCTGGTCGG GGGTGGGATC CGCGGGGTCG TCCGCGGCTG A
 
Protein sequence
MSASRWISFG ISRPPPAPRF KEERRSADSW SVSSSPRSST RAARRLLAPL LVVGLLAAAA 
TLLHQAFRHY DAARLGDDLL ALGPGVVLAA LGATAVSYLA MTGYDALALR YVGHSLPYRR
YGLASFVATA FGNNLGASAV VGAALRARVY SGWQVPGSAI TRIIGFNLVT LALGVAVLAG
GGMLRDPVRV GEALHLPGAA VLALGSLLLV FVAGYFVWAG VGGRAIGWRG RRIDRPAPRL
AVAQVVLSTF EWLSMAAALY VLLPARGRLP FLAFAVAFSI ATLAGLVSNV PGGLGVFETA
LVVLIGSTTS PAGLAVALVA YRLCYFVLPL LLAAVLLVLH EARRGVASPP APAAASTPAA
ASTPAPAAAP TGPRSPARLP AVLTPSVLGL VVAGAGVFML VVGDLPGRAL DVSAVTISLA
GLGALLMAWG LHRRLKRAWV GTLALLVGVT GIAAAHGDLV LSAVTAGLAL LLLPAHPVFP
RGTVLTRPRN LVWPVTAAVL VGVAVWWQEF SGSDGAVDAP LLVASISGDT SGADRLAMVA
GAVGVVMGGR RILRAVNPGP RVPCEVEMAK VAGIVARSGR CTSHLAFTGD KRFHFSPAGR
SFLMYQVEGR SWVVMGDPVG DPGGDQSDIR DLIASFVADV DRHGGRPVFY NVLTDHADLY
REHGLSLAKL GEEAVVPLDD FTLTGKARVN LRNCRNKSQR LGLSVDFVAP EDVAPLLPAL
REVSDAWLTH RNGKEKRFSL GAFDEEYVAR FPLAVVRHEG RVVAFATLWT DGEGREVQVD
LMRRLPDGPR TVMTYLFVEC ILWARENGFA SFSLGVAPLA GLRGDARPSA WDRMGHLLWT
HGERFYNFKG LRAFKQGFQP RWRTCYVAAP GGLALPKAMV DVATLVGGGI RGVVRG