| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2298 |
|---|
| Symbol | |
|---|
| ID | 5597239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1810187 |
|---|
| End bp | 1810957 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640930351 |
|---|
| Product | flagellin modification protein A |
|---|
| Protein accession | YP_001467627 |
|---|
| Protein GI | 157165433 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.970759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAG ATAAGGTCGT AGTAGTTACA GGGGGAGCTG GTAGGATAGG AAGCGCTTTT
ATAAGAGCGA TTGCTGGCCA AAACGGAGTT GGTGTGATAG CAGAGGTCGA TACAAAAAGA
GCAAATTTAT TAAAAGATGA GATTACAAGC GCGCAAAAAG ATGCGAGGAT CGAGGTTTTG
CAAATTGATA TCAGTGATGC AAATTCTATC AATGAAGCTA TAAATTTCTT GCATTCAAAA
TATGGTCACA TAGATGCACT AGTGAATAAT GCCTATCCAA AAAGTAAAAA TTACGGTAAG
AAATTTTTTG AGATCGACAT GGATGATTTT AATGCCTTTT TAAATTTACA TCTTGGCGGA
TACTTTAATA TCTCACAAAA TTTCATCAGG TATTTTTTAA GGCAAGGTCA TGGTAATATC
ATAAACATCT CATCCATTCA AGGTATCGGA GCGCCTGCCT TTGAGACATA TGAGGGGACA
AATATGCACT CTCCAGTCGA ATACACAGTC GTAAAACACG GCCTTCTTGG TATGACAAAA
TATATGGCAA AGATGTTTAA AAAAGATAAT ATCCGCGTGA ATGCCATAAG TCCTGGAGGG
ATTTTGGACG GACAGCCTGA GCCATTTTTA AGCCAATATA AAAAGAGATG TGGCACAAAA
GGCATGCTTG ACGCAAATGA TATATGTGGG GCTTTGGTGT ATCTGCTAAG TGACTCTTCA
AAATATCTAA ATGGACAAAA TATCGTAGTT GATGATGGCT TTAGCCTATA A
|
|---|
| Protein sequence | MLTDKVVVVT GGAGRIGSAF IRAIAGQNGV GVIAEVDTKR ANLLKDEITS AQKDARIEVL
QIDISDANSI NEAINFLHSK YGHIDALVNN AYPKSKNYGK KFFEIDMDDF NAFLNLHLGG
YFNISQNFIR YFLRQGHGNI INISSIQGIG APAFETYEGT NMHSPVEYTV VKHGLLGMTK
YMAKMFKKDN IRVNAISPGG ILDGQPEPFL SQYKKRCGTK GMLDANDICG ALVYLLSDSS
KYLNGQNIVV DDGFSL
|
|---|
| |