| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2197 |
|---|
| Symbol | |
|---|
| ID | 5596658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1786527 |
|---|
| End bp | 1787849 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640930325 |
|---|
| Product | Hsp12 variant C |
|---|
| Protein accession | YP_001467601 |
|---|
| Protein GI | 157163885 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1293] Predicted RNA-binding protein homologous to eukaryotic snRNP |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTACG CACATTTAGT TCAAATAGCA GATTATCTAT CAAAATTTAA AAAAATAAGC
CAGGCAAAGC GCGTAAGCGA CATGGCTATA CTTATCGAAT TTAGCGGCGA AAAGATCATT
TTTGATCTAA ATAAGTCAAA CTCAGCGATC TATAAAGATG ATGAGCTAAA AGAGGCGAAA
ATTTATCAAG CACCCTTTGA TAATGTCCTA AAAAAGCGCT TTAATGCCTC ACATATAAAA
AGCGTAGAGT GCCTAAAAGA CAATAGAATT TTAAAATTTA CCTGCACGCA AAGTGGCTCA
TATAAAAGCG AAAATTTCAT CCTTTATCTT GAATTTACAG GCCGCTTTAC AAACGCCGTG
ATAACTGATG AAAATGACGT GATCATCGAG GCACTAAGGC ATATCGACAA TAGCTACCGC
AAGATAGAAA CTGGCGAGGT TTTAAAAGAG CTGCCAGCCA TCGCTATAAA AGAAAAGCCG
TGCGAGCCGA TAACTGACTT TGAGGCATTT TTTAAAAGTG AAGCAGCCAG GATAAATGAG
GCTAGGATAG CTAGCTTGAA AGAAGCAAAG CTTGCTAGCG TGCAAAAAAA GATAGATAGC
ATGAGTGAAA TTTTAAACTC GCTTGAAGAT AAAGATGAGC TTATGAAAAA GAGCGAGGAG
TTTGCAAACT ACGGCACGCT CTTGCTTGCA AATTTGGCAA ATTTTAAAGG CTATGAGAGA
GAAATTTGCC TGAAAGATTT TGACGGCAAC GAGATAAAAC TAACTCTTAG CGATACACCC
AAAAATAGCG CAAATGAATT TTACTCAAGA TCAAAAAAAC TTCGCGCAAA AGCCCTTGGT
GTGGAGATAG AAAAGAGAAA TTTAAGTGAA AAGATCGAGT TTTTAGAGGG GCTAAAGTCG
CTTTTAAAAG AGGCAAAAAG TGCTTACGAG CTTGAAATTT TAAGCCCAAA AAACAAGGCA
AAACAAAGAG AGAGACAGAT AAAAGATGTG AGCGAAAATG CTGAAATTTT CTATATTAGA
GAGTTTAAAA TTTTAGTTGG CAGAAATGAA AAAGGCAATA TAAATTTGCT CGATCTTGCT
AAAAAAGACG ACATCTGGCT TCATCTAAAA GACGCCCCAA GCGCTCACGT CATCATAAAA
ACGAACAAGA GCAAAGTGCC AGAGGACGTG CTAGAAATGG CTGCTAAATT TTGCGTGGAA
TTTAGCGTAA AAGGGGCTGG CAGATACGAG GTGGACTACA CCAAACGTGA AAATTTAAGG
CGCGAAAATG GCGCAAACGT CACTTACACA AACTACAAAA CGATCATCAT AAATAAAGGC
TAA
|
|---|
| Protein sequence | MKYAHLVQIA DYLSKFKKIS QAKRVSDMAI LIEFSGEKII FDLNKSNSAI YKDDELKEAK
IYQAPFDNVL KKRFNASHIK SVECLKDNRI LKFTCTQSGS YKSENFILYL EFTGRFTNAV
ITDENDVIIE ALRHIDNSYR KIETGEVLKE LPAIAIKEKP CEPITDFEAF FKSEAARINE
ARIASLKEAK LASVQKKIDS MSEILNSLED KDELMKKSEE FANYGTLLLA NLANFKGYER
EICLKDFDGN EIKLTLSDTP KNSANEFYSR SKKLRAKALG VEIEKRNLSE KIEFLEGLKS
LLKEAKSAYE LEILSPKNKA KQRERQIKDV SENAEIFYIR EFKILVGRNE KGNINLLDLA
KKDDIWLHLK DAPSAHVIIK TNKSKVPEDV LEMAAKFCVE FSVKGAGRYE VDYTKRENLR
RENGANVTYT NYKTIIINKG
|
|---|
| |