| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2133 |
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| Symbol | |
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| ID | 5595635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | + |
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| Start bp | 1728430 |
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| End bp | 1732515 |
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| Gene Length | 4086 bp |
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| Protein Length | 1361 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640930274 |
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| Product | YbaK |
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| Protein accession | YP_001467550 |
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| Protein GI | 157164324 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAGTT TTAAAAAGCG AGGCTTAAAT TTAATGCAAA AAAATAGCGC TAAACCAGTT
TTGCAGATTT TTAAGAGGTT CTATGTAAAG ATAGCACTAC TTCTTTTTGC CTTCATCTTT
CTTGCACTTT TTGTCATATT TGCTGGCATA AACGATATAA AATATGAAAT TTCAACACTA
AATTTTATCA CTAGAAGCAA TATCGTCAAT ACATTTGTAG AGGTAAAAGA CAATATCACC
ACAAAGGCAA GACTCATAGC AAACGGCGTA GAGCCATTTT ATGAAGATAC TGTTGTAAGT
AAATTCTACG CCGCTTTTTA CGTGATAGCA AAAGATAACT CCTTGCTTTA TGAGCGTAAA
TTTGATGATG CCTTTGAGCT TCATAGCTAC GATATTTCGT GGTTTTCAGA TATCAAAGCA
GGCGAGTTTA GGCTCTCTGA TAGATTTTAC AAAAATAGAC GCTTTAAAGA TATCTACATA
GCTTACGGGC TAAAAAATGG CAATAAAATT CTCGCCCAGT TAAATCCAAA CCTTTTAAAA
AATAGGGTCG ATACAGGCTA CAATAAAAAC CTTGCCGCAT ACGTCTTTTT GGTCGATAAA
GATGGCAACC TCTCAAGAGA TGAGTTTTAT AGAAAATTTA TAAAAGAGGA CTTTAACAAA
TACATCTCGC AAGGTGGCGA GTTTAAAGCT GACAAGATCA TTTTTAAACT AAAGGATATG
AATTTTTACA AGATCAGCTA CCTAGAGGAG CAAAAGCTAT TTGTCATAAC AGGCTCTAGC
AGGCAAGCAC AGATCTTTAT CCAGCTAGTT CTAGTCGTGC TTTCGTTCTT GTGTTTTGTC
GCATTTAGCA TACTTTGGCT ACGTGATAAC TCATATATAA AAGATAAAAT TCTCTCTCCA
TTTACTAGAA TCACTCTTTT TGCGGCAGAT AAAAGTAAGC CAACTGATGA AGAATTTGAC
ATAAAAGAAT TTATCTCGCT AAATAACAGC ATCAAAAAAC TCTACGAAGA TAGAGATAAA
GCTTACGAGA CGGCACAAAG CTACGAGAGT AGATTTGGCT ATGTATTTGA AAAGAGCTTT
TTAAAGATCG TGGTCTTTGA CGCTTATACT GGCGTCATCA CGGACATTAG CAACGCTCTT
TTAGAAAATC TAGGCTACAA AAAAGATGAC GTAGCAGATC TAAATATCAA AGAGCTACTT
GAAGATGAGT CTAAAAATTT AGCAGAAAAT AGAGAAAACG CTATCAATAA TGATCTATCT
TATGAAGCTA AGCTAAGGCG TAAAAATGGC GAAATAATCG ATGTTTTAGC GACCCAAAGT
AGCTTCGAGC TAGAGAACAC AAGGCTAAAT TTCATACTCA TAAAAGATAT CACTCAAGAA
AAGATGACGC AAAGAAATGA CGATATCATC AAAAGCTATG TCTTTTTATC GCCAAATGTC
ATCGCAATAG CTTCAGCTAA TGAGCCATTT TTGATCATCC AAAGCACAAA CAATGTCGAG
AGAATTTTTA ATGTCCAAAG CCAAGGTCTG ATAAATTTAG AAGATATCAT CGCAAGCGAG
GACTTTGATA GCTTTAAAGC TGCCATGCTG GCAAGTAAAA AAGCCTTTTT ACAAGCAAGC
TTTAAAAATG AAGAGCTAAA TTTCATAGCA AATATGACAA ACGCTTATGG CAAGAAAATT
CCATTTAAGA TAAAGGCTAA ATTTATCGAT GCAGAAGGGC AAAAGGTCAT CTACTCATTT
ACCGATCTTA GCGATATGCT AAAGCTTCAA GAGAGATTTG AAAAACAAAG CAAAGAGAGC
AAGGCTCTGC TTTGGGCGAG TGAGGCAAAT GTCTTTACTT GGGATAAAAG AAGCGATATG
CTCAACATCT CAGACGAGCT GAGTAAAATT CTTGGCACGC AAAGCACTCT AAATTTCGAG
CAAGCAAAGT CGGTCTTTGT TGATGAGTTT GATAGTTTTT ATAGCTTTTT TGAGAGCTTA
AGAGATGCTC AAACATACAT CAAAGATATC AAGCTTTACA GCATAGATAA AGAAATTTTA
CACTTTAGAC TAAGGGCAAA AGCGCTTGAA TACGACGAAT TTGGCGAAGT AAGCTTGATA
AAAGGCACGT TAAGAGACCT TAGCCTAGAA GATAGCTTCT TTGTCTGCCA AGACCTGCTT
GCAAAAATTT TCTCATTTAG CAAAGAAGAG GTCGTCTTGC TTGATGAGGA GATGAGGGTC
ATTGACGCAA ATGACGCATT TTTTGAAAGT GCGGGCGCAA AAGATAGCGT ATATCTAAAA
GATATCACCT TTATAAAGCA AGGCTTAAGC GATATAAAAC ACCAGATCAT AGAGACCATA
AACCAAGGTG GCTCGTGGAG TGGCAAGGTT TGGAGCGAAA ATAATAAAAA CAAAAGCAAG
CTTGAAGTCA TAGAAATTTT ACCACTTATC GATGCGAGCG AGAAAAAAAC TGGCTACATC
ATGCTAGCAA TGCTTGCAAA TAACGAAGCA CAAAATGAGA AATATCTAGA ATTTATCGCA
TATCACGATC CGCTCACAAA GCTACCAAAT AGATTTTTAC TCTACAACAA GCTAAATTCT
CTCATACAAA AAAATGAACA AAAAATAGCC GTCATCTACC TTGATATGGA TGATTTTAAG
AGCATAAATG ACAACTTCGG TCACCAAATA GGCGATAAAT TTTTAGTAGC TATCTCTGAA
AAGATAGGCG CTATGTTTAA TGGCAAAAAT ATCTTTGCAA GGATAGGCGG AGATGAGTTT
GTAGGCGTTA TCAACTACGA AAATTTAGGC GAAGTCTATG AGATAGCGCA AAATATGCTA
AGGCTAGCTT CAGATGAAGT AAAAATAGAC GAGCTAAAAC TAAAAGCAAG CGCTAGCGTA
GGCATAGCCT TGGCTGATAG TGAGCTTGGA GCTGATGACG TGCTACAAAG AGCCGACTGG
GCGATGTATC AAGCCAAGAT AAGTGGCAAA AACAGAAGCT ATACATTTGA TGCGAAAAAA
GATGTCTATT TTAAGAGCCA ATACGAAGAT GGCTCAAAAA TTTTAAAAGC GCTTGACGCT
GGTGAGATGT TTTTAGAATT TCAACCAGAG ATCAGCTTTA GCACGGGCGA GACTTTAAGT
TTTGAAGCGC TGATTAGATG GAGAAAAGAT GGCGAGATCA TCTATCCAAG CGACTTTTTA
CCACTTATAA AGACAAGTAG CGCATCGAGC AATATCGCTT TATTTACGAT AAAAGAGGCG
CTTTTAGCAA GAAAAATGTG GCTAGAAAAT GGCATAAACG CAAAGGTTCG CGTAAATTTA
AGCGTTAAAA AGCTCTTTAC AGAAGAATTT TGGCATAAAT TTAAAGCGAT ATTTGATGAG
GATAAAAGCC TTGATCCAAC TGGGCTTATC ATCGATGTTA TCGACGCTGC AACAGCTACA
AATTTAGAAA TTTTAGAAAT TTATGTGAGA AAATATAAAG AGCTTGGCAT ACACTTCTCG
CTTGATGACT TTGCCTCATA CTCAAGCTCG ATCGAAGCTC TTGGCATGCT AAAGACAAAC
CGCTTTAATA TAGATAATAA ATTTTGCAAG CATATCTTTA ACTCAAAAGA GGCGCTTGAG
AGCATAAATA TGATAAGGTT TGTGGCTGAT AAATTTGGAC TAAATGCGAC TATAAAAAAT
ATCGATGACA AAAGAACGCT TGAGTTTTTA CTTGGTCTTG GTTTTGATAA ATTTCAAGGT
AACATTTTCT CATTAGCACT TTTGGCAAAA GATGCTGCTT CGTTTAAATT TGAAAGACCA
TATCTACACA TAAAAGACTA TAAAAATAGC GAGAATTTCG AGCTTTTCAA AGGCTTAGTC
GTGCTAAAAG AGCTTGCAAA TGAAGTGATA GCAAATTTAA ATCAAGACGA CAAACTAGCA
CAAAGCCTAA AGCAAAAAAT AGAAGACGAG ATAAAAAATA TAGGTAAATT TAATCAAGAA
ATTTCCATAA ATTTAAGCAA ACTAGCAAGC AGTAGTGACA GCGGCGAACT CTATAATCTA
GCCGTCTCCA TCATCAAAGA GTGCGATATA AATTTAGGTT TTAGTAAGGA GATAAGAGTT
GAGTGA
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| Protein sequence | MASFKKRGLN LMQKNSAKPV LQIFKRFYVK IALLLFAFIF LALFVIFAGI NDIKYEISTL
NFITRSNIVN TFVEVKDNIT TKARLIANGV EPFYEDTVVS KFYAAFYVIA KDNSLLYERK
FDDAFELHSY DISWFSDIKA GEFRLSDRFY KNRRFKDIYI AYGLKNGNKI LAQLNPNLLK
NRVDTGYNKN LAAYVFLVDK DGNLSRDEFY RKFIKEDFNK YISQGGEFKA DKIIFKLKDM
NFYKISYLEE QKLFVITGSS RQAQIFIQLV LVVLSFLCFV AFSILWLRDN SYIKDKILSP
FTRITLFAAD KSKPTDEEFD IKEFISLNNS IKKLYEDRDK AYETAQSYES RFGYVFEKSF
LKIVVFDAYT GVITDISNAL LENLGYKKDD VADLNIKELL EDESKNLAEN RENAINNDLS
YEAKLRRKNG EIIDVLATQS SFELENTRLN FILIKDITQE KMTQRNDDII KSYVFLSPNV
IAIASANEPF LIIQSTNNVE RIFNVQSQGL INLEDIIASE DFDSFKAAML ASKKAFLQAS
FKNEELNFIA NMTNAYGKKI PFKIKAKFID AEGQKVIYSF TDLSDMLKLQ ERFEKQSKES
KALLWASEAN VFTWDKRSDM LNISDELSKI LGTQSTLNFE QAKSVFVDEF DSFYSFFESL
RDAQTYIKDI KLYSIDKEIL HFRLRAKALE YDEFGEVSLI KGTLRDLSLE DSFFVCQDLL
AKIFSFSKEE VVLLDEEMRV IDANDAFFES AGAKDSVYLK DITFIKQGLS DIKHQIIETI
NQGGSWSGKV WSENNKNKSK LEVIEILPLI DASEKKTGYI MLAMLANNEA QNEKYLEFIA
YHDPLTKLPN RFLLYNKLNS LIQKNEQKIA VIYLDMDDFK SINDNFGHQI GDKFLVAISE
KIGAMFNGKN IFARIGGDEF VGVINYENLG EVYEIAQNML RLASDEVKID ELKLKASASV
GIALADSELG ADDVLQRADW AMYQAKISGK NRSYTFDAKK DVYFKSQYED GSKILKALDA
GEMFLEFQPE ISFSTGETLS FEALIRWRKD GEIIYPSDFL PLIKTSSASS NIALFTIKEA
LLARKMWLEN GINAKVRVNL SVKKLFTEEF WHKFKAIFDE DKSLDPTGLI IDVIDAATAT
NLEILEIYVR KYKELGIHFS LDDFASYSSS IEALGMLKTN RFNIDNKFCK HIFNSKEALE
SINMIRFVAD KFGLNATIKN IDDKRTLEFL LGLGFDKFQG NIFSLALLAK DAASFKFERP
YLHIKDYKNS ENFELFKGLV VLKELANEVI ANLNQDDKLA QSLKQKIEDE IKNIGKFNQE
ISINLSKLAS SSDSGELYNL AVSIIKECDI NLGFSKEIRV E
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