| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2108 |
|---|
| Symbol | |
|---|
| ID | 5596847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | + |
|---|
| Start bp | 1757936 |
|---|
| End bp | 1759048 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640930298 |
|---|
| Product | SPFH domain-containing protein |
|---|
| Protein accession | YP_001467574 |
|---|
| Protein GI | 157165488 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTG ATTTAAATGA TTATTTCAAC AAAAAAAAGC CAGGTAATGA CAACAGGAGC
TCAGGTCAAA ATAATGACAA AGAGCCACCT TTTAAAAAGG ATTTTAAAAT GCCAAATATA
CCAAGTGGCT TTGGCAAATT TGGTGCGCTA GCCTACATCA TAATCGCCAT TATCGCGATC
CTTGCTATCA CTCAGCCATT TAAAGTGATA CACTCAGGCG AGGTCGGCAT CAAAGCCACA
GCGGGTAAAT ATGAGCCAAA TCCTCTGCAA CCAGGATTTC ACTTCTTTTT GCCATTTATC
CAAAATATCA TTGTAGTTGA TACCAGAGTT AGGATCATCA ACTACACTTC AGGCGAGGAC
ATGGGCGAGA GCTTGCAAAA GTCTTATCAG GGAGCTGGAA TTTTACGCAA AAACTCTATC
TCAGTTTTGG ACGCTAGAAA TTTACCAGTT AGCATCGATA TCACCGTGCA GTACCGCCTA
AATCCAGAAA ATGCACCACA AACTATCGCA TCTTGGGGTC TTAGCTGGGA GAGCAAGATC
GTCGATCCTG TCGTGCGTGA CGTGGTTCGC AGCATCGCTG GTAAATACAC AGCCGAAGAG
TTGCCAACTA AAAGAAACGA CCTTGCTAGG CAGATCGATG AGGGCATAAG AAAAGACATC
GACTCTCAGC CAAACAAGCC AGTCGAGCTT CTAACTGTGC AGCTTCGTGA GATCATCTTG
CCTTCAAAGG TAAAAGAGCA GATCGAGCGC GTCCAGATCG CTAAACAAGA GGCCGAGAGG
ACAAAATACG AGGTCGAGCG GGCAAATCAA GAGGCTCTAA AACAAGCTGC CCTTGCAGAA
GGTAGTGCAA AAGCTGCTAT CATCGAGGCA AAAGGTAAGG CTGATGCTAT CAAGATCGAG
GCTGATGCGA CTGCGTATGC AAACAAAGAG ATCGCAAAAA GTGTCGATCA AAATTTACTA
AATTTAAAGC AGATCGAGAC GCAAAATAGA TTTAACGACG CTCTTAAAGA GAACAAAGAT
GCCAAAATTT TCTTAACACC TGGTGGAGCT GTGCCAAATA TCTGGCTAGA TGCAAAAGAT
AGGGCAAAAG CTAGCTCAGT TAGCGAAAGG TAA
|
|---|
| Protein sequence | MPADLNDYFN KKKPGNDNRS SGQNNDKEPP FKKDFKMPNI PSGFGKFGAL AYIIIAIIAI
LAITQPFKVI HSGEVGIKAT AGKYEPNPLQ PGFHFFLPFI QNIIVVDTRV RIINYTSGED
MGESLQKSYQ GAGILRKNSI SVLDARNLPV SIDITVQYRL NPENAPQTIA SWGLSWESKI
VDPVVRDVVR SIAGKYTAEE LPTKRNDLAR QIDEGIRKDI DSQPNKPVEL LTVQLREIIL
PSKVKEQIER VQIAKQEAER TKYEVERANQ EALKQAALAE GSAKAAIIEA KGKADAIKIE
ADATAYANKE IAKSVDQNLL NLKQIETQNR FNDALKENKD AKIFLTPGGA VPNIWLDAKD
RAKASSVSER
|
|---|
| |