| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_2039 |
|---|
| Symbol | pyrB |
|---|
| ID | 5596042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1284420 |
|---|
| End bp | 1285349 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640929848 |
|---|
| Product | aspartate carbamoyltransferase catalytic subunit |
|---|
| Protein accession | YP_001467130 |
|---|
| Protein GI | 157165632 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
|---|
| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.485925 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTACA AACATAAAGA TTTGATAGGA ACTAGAGAGC TTAGCAAGGA AGAAATTTTA
TATTTTCTAG AGGCGGCGAA AGAGTTTAAG GAGCTAAATT TAAGCCAAGT GAAAAAAAAT
GACTACCTTC GTGGAAAGAC CACGATCAAC GCATTTTATG AAAACTCGAC AAGAACTAGA
ACATCCTTTG AGATCGCAGC AAAGAGGCTT GGAGCTGATA CGATAAATTT CAGCTCATCA
AACTCTAGCG TGACAAAGGG CGAGAGCCTA AATGACACGA TGAATAATAT GGCTGCTATG
AGAACCGATA TCATCGTGCT TCGTCACCCA AGCTCTGGAG CGGCGAAATT TGCAGCTGAT
AGAACAGAGG CTAGCGTCGT AAATGCAGGG GACGGCACAA ATGAGCACCC AAGTCAAGCT
CTGCTTGATC TTTTCACGCT AAGAGAGCAT GGCAAAATTT TGGATAAAAA TTTAAACGTG
GCGATCATCG GTGACATCGC TAGAAGCCGC GTGGCAAGGT CTGACATCTG GGCGATGAAG
AAATTTGGCA TAAATTTAAA GCTCTTTGCG CCAAGGATGA TGATGCCAAA AGACGCTGAG
GTATTTGAAT CTCAAATTTG CAAAAATATG GAGGAGGCTT GCGAGGGTAG CGACGTCATC
ATCATGCTTC GCATCCAGCT AGAGCGTGGC GGTGCGGACG TGGCGTTTCC AAGCTCGAGA
GAGTACTCGA AATTCTTTGG ACTAAATAAA AATAGGATAA AGCTAGCAAA GCCTGACGCG
ATCGTGCTAC ACCCAGGACC TATAAATAGG GGCGTGGAGT TAAATTCAGA CGTGGCTGAC
GGCACGCACT CAGTCATACT AAATCAAGTT GAAAACGGCG TTGCTATAAG AATGGCGATA
CTAAATACGC TTGCAAAAAA TAGGGGCTAA
|
|---|
| Protein sequence | MGYKHKDLIG TRELSKEEIL YFLEAAKEFK ELNLSQVKKN DYLRGKTTIN AFYENSTRTR
TSFEIAAKRL GADTINFSSS NSSVTKGESL NDTMNNMAAM RTDIIVLRHP SSGAAKFAAD
RTEASVVNAG DGTNEHPSQA LLDLFTLREH GKILDKNLNV AIIGDIARSR VARSDIWAMK
KFGINLKLFA PRMMMPKDAE VFESQICKNM EEACEGSDVI IMLRIQLERG GADVAFPSSR
EYSKFFGLNK NRIKLAKPDA IVLHPGPINR GVELNSDVAD GTHSVILNQV ENGVAIRMAI
LNTLAKNRG
|
|---|
| |