Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1990 |
Symbol | |
ID | 5597222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 1326585 |
End bp | 1327073 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640929890 |
Product | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase |
Protein accession | YP_001467172 |
Protein GI | 157165559 |
COG category | [R] General function prediction only |
COG ID | [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAAA TTATATTTTT AGATGTTGAT GGGTGCCTCA CTGATGGCAA GATCATCTAC AATGCAAACG GCGAAGAGCT TAAATTTTTT GATGTAAAAG ATGGCTACGC GATAGAGAGC TGGCTAAAAC TTGGCAAGAA AGTGGCTATC ATCACTGGCA GAAAGTCGGC TATCGTTGAG CGAAGGGCTG AGGACCTAAA GATAAACCAC GTCTATCAAG GCGTTGGCGA TAAATTTGAA GTAGCAAGCG AGATATTAAA ATTTGAAGGG CTTAGCTTTA AAAACGCAGC AGCTATCGGC GATGACTATA ACGACTATAA AATTTTAGAC GCAGTTGCAT GGAGCTTTAA GCCAAAAGAT GCCATTAAAG AGCTTGATGT AAAGACAAAG CTAAAGCACA AAGGTGGCAA TGGCGCTGTT AGAGAGATGA TCGAGATGAT CATAAAATCA GAAAATTTAT ATGACGAGTG GTCTAAGCGT TGGTTGTAA
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Protein sequence | MIEIIFLDVD GCLTDGKIIY NANGEELKFF DVKDGYAIES WLKLGKKVAI ITGRKSAIVE RRAEDLKINH VYQGVGDKFE VASEILKFEG LSFKNAAAIG DDYNDYKILD AVAWSFKPKD AIKELDVKTK LKHKGGNGAV REMIEMIIKS ENLYDEWSKR WL
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