| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_1975 |
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| Symbol | prrB |
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| ID | 5596404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter concisus 13826 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009802 |
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| Strand | - |
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| Start bp | 1338255 |
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| End bp | 1341932 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640929904 |
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| Product | anti-codon nuclease masking agent |
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| Protein accession | YP_001467185 |
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| Protein GI | 157164495 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.528264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAATA ATCTTAGCAT TTCTCTTGTT TTATCTAGCA TTTTATGTAG CTGCTTAGAC
GCTCAGGTCA TGGATATAGG GACAAATTTT TATAGAGATT ACCTCGATCT TGCGCAAAAT
AAAGGCATCT TTAAAGCCAC AGATGCACCA CTAGAATTTA CGCAAAGAAA CGGCACTAAA
TTTACGTTTG ATAAGATCCC AAACAACAAC GCAAGAAACA ATAAAGGCAA CTTTACTGCG
CTTGGGCGAA GTTTTGTAGT GACGGCAACG CACGTTGAAA AGGGGGCTAA CGCAGTTGAT
TACAATGAAA AAAGGGGCTT TTTTGGCAAT ACAAAATATG AGTATCTGAC TAGATATTCA
TCTACTTCAA CATCCAAAGT CTATAACACT GAAACGACAT ATCTAAGAAC TACTAAATTT
ATAGTAGAAG GCAGTGTTGA TCCTATAGAT ATACCAGATC TTGAAATTTC GCCTGCTTCT
TATAATGATC AAGATATAGC AGAGATTGAA GTTAGAAAAA TAGAAAATTA TTTTAAATCG
ATAAAAAATA GCGGTGGCGC AAATGGTAAT GATATTTTTG CTTATCAAGC TGGCATTGGA
CTACTTAGCT TAGAAAAACC AAGGATCGAC CCTATCACAG GAAATCCAAC TGGTGGATAC
GATACTATAG TAGATAAAGA TGACACTAAT AATCAAACGT TGGGTGCAAG TTTAAATAAT
ATAAATATAA TTAACTCGGT TGCATATAAA AAGAAAATTC CACTACTTGG AGATGGCAAT
GAAGTAAATG GAATTTACGT GCTTCCATTT ACTAATGACA ACTTTAGAAA TAAACTTTAT
ATAGGCGATA GTGGCTCAGG ATTTTTTGCT TATGATACTT TGAATAATAA ATGGGTGTTG
GTTGGCGTAA CTTCGGTGGC CAATGGCACT CAAAACTACG CTTCTATCGT TACTGCAAGA
GATTTTAACG ACTATAAAAA AGGGTATGAA AATTTAGTAA GTGGCGTAAA TGTCCTAGGT
AGCGCGCTAG TGCAAAACAA AGATAATATA TTTAGCAGTG CAAATGGCTC AAATATCACG
CTAAGCACTA ACCTAGACTT AGGACATGGC GGTATCGTCG TAAATAGTGG CGACTTTACT
CTAAATAGCA CAAATGGTAG CAAGATAGCG AAATTTGCAG GTTTTGACAT AGCTCGGGGC
GCTAGTTTAA ATTTAAACGT CACTTCAGAC ACAAGCGTGC ATAAGCTAGG CAAAGGCAGC
TTGATAGTAA GCTCAAGTGG CAACAAACCA CTAAGGCTAG GCGAGGGCGT GGTTGAGCTA
AGAGCTTTAA ACGCCTTTGA TAAAATTTAT CTAACAAGTG GCAGAGGGCT CTTAAGGCTT
GGCGTGAATG AAAATTTAAA TGATAAAATT TTCTTTGGCA ATGGCGGCGG AGCACTTGAT
CTAAATGGCT TTGATCAGAC TTTTGACAAT ATATCAGCCA ACTCAAGCGA TGCGAAGATA
ACAAATGCAA ACTCACAAAG GGCGACGCTT ACTATAAACG GCGAAAGTGG CAAAGATACG
ATATTTCACG CAAGTATCGA TAAAAATATA GAGCTAAGAC ATAGCGGGCA GGGCAAGGAG
CTTGTTTTTG ACGGAGGATT TGACATTGAT GGTGCTTTGA GCCTAGAAAA TGCCAAGGTT
ACGCTCCAAG GTCATCCAAA AACGCACGCC ATTGGCGATG CTAGCGTTTT AACTCCCCTA
GCAAAGAGCA AGATAGCCGC AGCTGGTTTA ATCGAGCCAG ACTATATGGA TCTAGCTCGC
CCATCTACTC TCTCTCAGCC TGATTGGGAC GAGAGAAAAT TTAGTGCAAA AGATGGCATA
AAGCTTAAAT CATCAGAGCT TACCATAGGT AAAGATGCTA AGCTAAATGG TGACATCACA
GCTAAAAACT CGGTCATAAA TTTAAGTGGC GAGCTAACTC ACTATATAGA TAAATTTGAT
GGCTCAAATA CCTATGATGA CGGTTTAAAG TATCGCCAGG ATATTGAGAG TAAAAATTTA
CTTGTTAAAG ACGTTAAATT TGACAATAAA ATCGTTATGG ATAGCGATAG TCTGCTAAAA
GCAGGAGGCG GTGCAACTAA GCTAAAAGAG CTAGTTATAA ATGGCAAAGA TACGCCTTTG
GCTAAAGATG TGCTCTTAGG CGATGGTAAA TTTGAGGTAG AAAATTTAGA GGTTAGTGGC
GCGCAAAAGC TTGGCTTTGA GCCTGATAGC TTCATAAAAA AGAGCCTAAA GATAAAGAGC
TTTGGCAGTG AAAATGAGCC AGTACTTGAC TTTAAAAAGG TCTTAATCCT TGGCGCTGGG
ATGAAATTTG ATGTTGATTT TACTGCGGCG CTTAAAGGCG GTATGGTGCT TGATAAAACA
TATACTTTAG TAAGCGCACA AAGCATCATA AATGAGGGCG CTATCTTTAA CAACGAGCAA
AAACTTGGGG ATTTGTTTAT GACCTACACC ATAAGTGACG GCAAGATCGT GATGAAGCTA
AGCGACAAAA AGGGAGAAAA TCCAGCCGTT TCGTCCAATG TGGTTCAAGA GAGGGTTTCT
AAATTTAGCC AAAGAGAAAA TAAAATCCTA AGCATGCTAA AAGGCACGCC TGAATTTGTG
CAAGCAATCT CAAGCGGTGA CGATGAGGCG CTAAGAAAAC TAGCGCAAAA AGCCGACAAA
GATATGAGAG AAATTTCTAC TTCTTCGCTC AAAATGAGCA TAAAAGCCTT GCAAAACAGC
AACGAGCTGA TGAACTCTAG GTTATTTCAG GTCACGCAGC TAAGGGCAAA GGCTGATATC
TCGCAGTTTA AGCTAGCTGG ACTTGAAAGT GACATCATGC CAAGCGCGAA GATGGCTTAC
GAAGCAGCAG AAGCTAGCAG GGAGAGAAAC AACTTTTGGG CAAATGTAAA TGGTGCTTAT
TTTAAAGATA AAAAAAGCGA CGGGGATCTT AAATTTTATG GCACAAATAT CGGCTATGAC
AGAGGTTATG ACGAGTTTAT CTTAGGTGTA AGCGCTGGGG TAAGCAAAGC TAAATTTAGC
TCAAATGTAT TAAAAGATGA TGCTAAAATT TATAGTTTTG GTGCGTATGG GCTTTTTGAA
AGAGGAGCTC ACGAGATACA AAGTAACTTA AATTTTGCCT TTATAAACTC AAAACGCAGC
CTAGATGAGG CGCAAAAAGC TAGTGCAAAA GGCAGAGGCA TCCTCTCAAG CAACTACTAT
AAATATAAAA TTTCACTCTC TAAAAGTGGC GAGTATGAGC AAAGCATAAA GCCTCTACTC
GCATTAGAGC TTGGCGCTAA CGGCATTGAT GGATTTAAAA ATGACCGATA TGATCAAAAG
AGCATCAATG ACTTTAATGT GGCTGTGGCA GCAGGAGTAG AATATGCTTT AAACAGCGAT
AAAAACGTAT TTGGCGTGCA ATTTTTAGTA AAACAAAGTG TATATAACTC AGAAGATAAG
TCTTATGTTT CGCTTAATAA TTCAAATGAG TATGTTGATT ACAAGCTTGA TAATAATAAG
CTAAGCTATA AGCTTACTTT AAACTCAGAC ACCAAACTTA GCGAAAATTT GGTTCTCTCT
TCTCAGCTAA GTGGCATGCT TGATAATGAT AAAAACTACG GCATAAGTGG TGGTTTAAAG
ATCGAGTATA AATTTTAA
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| Protein sequence | MKNNLSISLV LSSILCSCLD AQVMDIGTNF YRDYLDLAQN KGIFKATDAP LEFTQRNGTK
FTFDKIPNNN ARNNKGNFTA LGRSFVVTAT HVEKGANAVD YNEKRGFFGN TKYEYLTRYS
STSTSKVYNT ETTYLRTTKF IVEGSVDPID IPDLEISPAS YNDQDIAEIE VRKIENYFKS
IKNSGGANGN DIFAYQAGIG LLSLEKPRID PITGNPTGGY DTIVDKDDTN NQTLGASLNN
INIINSVAYK KKIPLLGDGN EVNGIYVLPF TNDNFRNKLY IGDSGSGFFA YDTLNNKWVL
VGVTSVANGT QNYASIVTAR DFNDYKKGYE NLVSGVNVLG SALVQNKDNI FSSANGSNIT
LSTNLDLGHG GIVVNSGDFT LNSTNGSKIA KFAGFDIARG ASLNLNVTSD TSVHKLGKGS
LIVSSSGNKP LRLGEGVVEL RALNAFDKIY LTSGRGLLRL GVNENLNDKI FFGNGGGALD
LNGFDQTFDN ISANSSDAKI TNANSQRATL TINGESGKDT IFHASIDKNI ELRHSGQGKE
LVFDGGFDID GALSLENAKV TLQGHPKTHA IGDASVLTPL AKSKIAAAGL IEPDYMDLAR
PSTLSQPDWD ERKFSAKDGI KLKSSELTIG KDAKLNGDIT AKNSVINLSG ELTHYIDKFD
GSNTYDDGLK YRQDIESKNL LVKDVKFDNK IVMDSDSLLK AGGGATKLKE LVINGKDTPL
AKDVLLGDGK FEVENLEVSG AQKLGFEPDS FIKKSLKIKS FGSENEPVLD FKKVLILGAG
MKFDVDFTAA LKGGMVLDKT YTLVSAQSII NEGAIFNNEQ KLGDLFMTYT ISDGKIVMKL
SDKKGENPAV SSNVVQERVS KFSQRENKIL SMLKGTPEFV QAISSGDDEA LRKLAQKADK
DMREISTSSL KMSIKALQNS NELMNSRLFQ VTQLRAKADI SQFKLAGLES DIMPSAKMAY
EAAEASRERN NFWANVNGAY FKDKKSDGDL KFYGTNIGYD RGYDEFILGV SAGVSKAKFS
SNVLKDDAKI YSFGAYGLFE RGAHEIQSNL NFAFINSKRS LDEAQKASAK GRGILSSNYY
KYKISLSKSG EYEQSIKPLL ALELGANGID GFKNDRYDQK SINDFNVAVA AGVEYALNSD
KNVFGVQFLV KQSVYNSEDK SYVSLNNSNE YVDYKLDNNK LSYKLTLNSD TKLSENLVLS
SQLSGMLDND KNYGISGGLK IEYKF
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