Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CCC13826_1933 |
Symbol | nifJ |
ID | 5596576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter concisus 13826 |
Kingdom | Bacteria |
Replicon accession | NC_009802 |
Strand | - |
Start bp | 232366 |
End bp | 235944 |
Gene Length | 3579 bp |
Protein Length | 1192 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640928837 |
Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
Protein accession | YP_001466147 |
Protein GI | 157164373 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.135787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAAA TAATGAAAAC TATGGACGGA AACGAGGCCG CAGCTTACGC GTCATACGCA TTTACCGAAG TAGCTGGAAT TTACCCTATC ACTCCTAGCT CGCCTATGGC TGACTATACT GACCTTTGGG CAGCGCAGGG CAAGAAAAAT TTATTTGGTA TGCCAGTAAA AGTAGTCGAA ATGCAAAGCG AGGGCGGTGC AGCTGGCACG GTGCATGGCT CGCTACAAGT TGGCGCGCTA ACTACGACCT ACACAGCTTC TCAAGGCCTA CTTTTAAAAA TTCCAAATAT GTATAAGATA GCAGGTCAGC TCCTCCCTGG TGTCATCCAT GTCTCAGCTC GCTCTCTGGC GGCACAGGCT CTTTCAATAT TTGGCGACCA CCAAGATATC TACGCCTGTC GCCAAACTGG CTTTGCTATG CTAGCAAGCG GCTCGGTGCA AGAGGTGATG GACATCGCTG GCGTGGCGCA TTTAGCGGCG ATTAAGGGCA GAGTGCCATT TTTACACTTC TTTGATGGCT TTAGAACGAG CCATGAAATT CAAAAAGTAG AAGTGATGGA CTACGCGCAC TTTGATAGAC TTCTTGACCG CGAAGCATTG CAGAAATTTA GAGACGAAGC GCTAAATCCA GAGAGCCCAA AAACAAGAGG CACAGCGCAA AATGACGATA TCTACTTTCA AACAAGAGAG CTAAGCAACC GCTTTTATAA CGCAGTGCCA GATATCGTAG CAGAGTATCT AGCTGAAATT TCAAAGATCA CTGGCCGCGA CTACAAGCCG TTTAACTACT ACGGCAACCC AGAAGCGACG CGCGTCATCG TAGCTATGGG CTCAGTGACG CAAACTCTTG AAGAGGTCGT TGATTATCTA AACGCAAAAG GCGAAAAGGT GGGCATCATC AAGGTGCATT TGTACCGCCC ATTTAGCACG AAGTATCTCT TTGACGTGAT GCCAAAGAGC GTGAAAAAAA TAGCCGTTCT TGACCGCACA AAAGAGCCTG GCAGCCTTGG CGAGCCACTA TATCTTGATA TAAAAGCTGC ATTTTACGGC CAAAAAGACG CTCCAGTTAT CGTTGGCGGC AGATACGGCC TAAGCTCAAA GGATGTCGAT CCTGCGCAAA TGCTAGCTGT GTTTGAAAAT TTAAACCAAA GCGAGCCAAA AGACGGCTTT ACGGTGGGTA TCGTTGATGA CGTCACTTTT ACCTCGCTAC CAACTGGAGA GAAAATTTCA CTAAGCGATG AGAGCGTTAA AGAGTGCTTA TTTTACGGCC TTGGCGCTGA TGGCACCGTG GGCGCAAACA AAAACTCTAT AAAGATCATC GGCGATAAGA CTGATCTTTA CGCACAGGCA TATTTTGCCT ACGATAGTAA AAAATCAGGC GGTTACACGC GCTCGCACCT TCGCTTTGGC AAAAAGCCGA TCCGCTCGAC CTATCTCGTC TCAAACCCGC ACTTTGTAGC CTGCTCAGTC GCAGCATATC TTGAAATTTA TGACGTGATT GACGGCATTA GAGAAAACGG CACATTTTTA TTAAACTCTA TCTGGGACGC AGAGCAGACC ATAGCGAAGC TACCAAATAA AGTTAAGAAA ATTTTAGCTA GCAAAAATAT AAATTTCTAC ATCATAAACG CAACAAAGCT AGCACACGAC ATCGGCCTTA AAAACCGCAC AAACACCATA ATGCAGTCGG CATTTTTCAA GCTTGCTGAC ATCATACCAT TTGAAGATGC GCAAAAATAT ATGAAAGAGT ACGCGCACAA AGCCTACGCT AAAAAAGGCG AGGCGATCGT GCAGATGAAC TACAACGCTA TCGACGTTGG CGCAAATGGA CTCATAAAAG TACCAGTCGA TCCTGCGTGG GCAAATTTAA TAGACGATGA ACAAAAAGAT GAAAAATACA TCGGCAACAG CTTCATCGAA AACGTTGTAA AACCGATAAA TGCGGCCAGA GGTGATAGCC TACCAGTCTC AACCTTCATA GGCTACGAGG ACGGCCACTT TGAAGCTGGC ACGACGGCTT ACGAGAAACG CGGCGTTGGC GTCATGGTGC CAAAATGGAT CGAGCAAAAC TGCATCCAGT GCAACCAGTG CGCATTTGTC TGCCCGCACG CTGTAATCAG GCCATTTTTG ATAGACGAAA ACGAGCTTAG CGCAGCCCCA CAAGGCGTAA AAGAGCACAA TCTAGAGGCA AAAGGCAAAG AGCTCAAGGG ACTAAAATAC AAGATCCAAG TAAGCCCGCT AGACTGCACC GGATGCGAGC TGTGCGCGCA AAACTGCCCA AGTAAAGAAA AATCGCTCGT AATGGTGCCG CTTGAAGAAG AGCTAGGCAA AAACGAGCAA GAAAATGCTG ATTATCTATT TAAAAAGGTC GCTTATAAAG ACGATCTCAT GAACAAAGAG AGCGTTAAAG GCGTTGGCTT TGCTAAGCCG CTCTTTGAAT TCCACGGCGC TTGCCCAGGA TGTGGCGAAA CTCCGTATAT CACGCTTATT ACAAGGCTTT TTGGCGAGCG TATGATCGTG GCAAACGCGA CTGGTTGTAG CTCGATATAT GGCGGCTCAG CCCCATCTAC TCCGTACACC ACAAATGACG AAGGCAAGGG CGTTGCGTGG GCAAATTCGC TATTTGAAGA TAACGCTGAG TTTGGCATGG GTATGAACGT AGCGATCGAG ACTATGCGCC ACCGCATCGA AGATATAATG AGAAACAACA TAGATAGCGT GCCAAACGCA CTTTCAGCGC TTTACAACGA CTGGATAAAT TTCAAAAATG ACGGCGAAAA AACGCAAGAG ATCACGAAAA ATTTATTGCC TATTTTAGAG CAAAATTTAA GCGCGCTAGG CGTGAAAGAA ATTTTAGAGC TTAAGAAATT TCTCGTCAAA AAGTCGCAAT GGATCATCGG CGGCGACGGC TGGGCGTATG ACATCGGCTT TGGCGGACTT GACCACGTGC TAGCAAGCGG TGAGAACGTA AATGTGCTAG TGCTTGACAC CGAGGTTTAT TCAAATACTG GTGGCCAAAG CTCTAAATCA AGCCGCGCAG GCTCGATAGC GCAGTTTACG GCTAGCGGCA AGCCGGCTCA GAAAAAGGAC CTTGGCTACA TCGCGATGAC TTACGGCAAC ATTTTCGTAG CACAGATCAA CTCAAACGCA AGCCAAGCAA ACGTGATAAA AGCGATCGCA GCAGCCGAAG CCTATGACGG CCCAAGCCTC ATCATCGCCT ACTCTCCGTG CATCGCTCAC GGCATCAAAG GCGGCTTGTC GCAGTCTGGT GGCCAAGGCG AACTCGCTAC AAAATGCGGA TACTGGCCGA CATATCTATA CGATCCGCGC CTTTTAAAAG AGGGGCAAAA TCCGCTCAAA ATCACTTCAA AAGAGCCTGA CTGGTCGCTT TATGAAGAGT TTTTGCTAAA CGAGGTTCGC TACAACTCGC TTAAAAAGAC CAACCCTGAG CACGCAGACG AGCTACTAGC TAAAAATAAG GCCGATGCGC AAAGACGCTA CCGCCAGCTA AAACGCCTAA GCCTAGCCGA CTTTAGCGAC GAGATAGAGA ACAGCGAAGC TGCGCAAAGC GCTGAATAA
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Protein sequence | MSKIMKTMDG NEAAAYASYA FTEVAGIYPI TPSSPMADYT DLWAAQGKKN LFGMPVKVVE MQSEGGAAGT VHGSLQVGAL TTTYTASQGL LLKIPNMYKI AGQLLPGVIH VSARSLAAQA LSIFGDHQDI YACRQTGFAM LASGSVQEVM DIAGVAHLAA IKGRVPFLHF FDGFRTSHEI QKVEVMDYAH FDRLLDREAL QKFRDEALNP ESPKTRGTAQ NDDIYFQTRE LSNRFYNAVP DIVAEYLAEI SKITGRDYKP FNYYGNPEAT RVIVAMGSVT QTLEEVVDYL NAKGEKVGII KVHLYRPFST KYLFDVMPKS VKKIAVLDRT KEPGSLGEPL YLDIKAAFYG QKDAPVIVGG RYGLSSKDVD PAQMLAVFEN LNQSEPKDGF TVGIVDDVTF TSLPTGEKIS LSDESVKECL FYGLGADGTV GANKNSIKII GDKTDLYAQA YFAYDSKKSG GYTRSHLRFG KKPIRSTYLV SNPHFVACSV AAYLEIYDVI DGIRENGTFL LNSIWDAEQT IAKLPNKVKK ILASKNINFY IINATKLAHD IGLKNRTNTI MQSAFFKLAD IIPFEDAQKY MKEYAHKAYA KKGEAIVQMN YNAIDVGANG LIKVPVDPAW ANLIDDEQKD EKYIGNSFIE NVVKPINAAR GDSLPVSTFI GYEDGHFEAG TTAYEKRGVG VMVPKWIEQN CIQCNQCAFV CPHAVIRPFL IDENELSAAP QGVKEHNLEA KGKELKGLKY KIQVSPLDCT GCELCAQNCP SKEKSLVMVP LEEELGKNEQ ENADYLFKKV AYKDDLMNKE SVKGVGFAKP LFEFHGACPG CGETPYITLI TRLFGERMIV ANATGCSSIY GGSAPSTPYT TNDEGKGVAW ANSLFEDNAE FGMGMNVAIE TMRHRIEDIM RNNIDSVPNA LSALYNDWIN FKNDGEKTQE ITKNLLPILE QNLSALGVKE ILELKKFLVK KSQWIIGGDG WAYDIGFGGL DHVLASGENV NVLVLDTEVY SNTGGQSSKS SRAGSIAQFT ASGKPAQKKD LGYIAMTYGN IFVAQINSNA SQANVIKAIA AAEAYDGPSL IIAYSPCIAH GIKGGLSQSG GQGELATKCG YWPTYLYDPR LLKEGQNPLK ITSKEPDWSL YEEFLLNEVR YNSLKKTNPE HADELLAKNK ADAQRRYRQL KRLSLADFSD EIENSEAAQS AE
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