Gene CCC13826_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCCC13826_1901 
Symbol 
ID5595639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter concisus 13826 
KingdomBacteria 
Replicon accessionNC_009802 
Strand- 
Start bp2001060 
End bp2001701 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content44% 
IMG OID640930545 
Productoxidoreductase htatip2 
Protein accessionYP_001467810 
Protein GI157165479 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0245456 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TCGCCCTTAT AGCAGGAGCC AGCGGCGCTG TAGGAAGTGA AATTTTAAAA 
GATTTATGTG GGAGTGAGCA CTATAACAAG GTGGTCGCTC TCGTTAGGCA TGAGTTAGAT 
TTTACTCATG AAAAGCTTGA AGTAAAGATA GTAAATTTTG ATGATTTTAA AGATGAGGTG 
CCATTTATCG CTGATGACGT ATTTTGCGCA CTTGGCACGA CGATGAAGGC GGCAAAACAC 
AAAGAGCAGT TTTATAAAGT CGATGTGACC TATCCGATAA ATTTCGCCAA ATTTGGCTTG 
GAGTGCGGTG CAAAACGCTT TGTCTTGCTC TCGGCTGCAG GGGCAAACAG AAAGTCAGGC 
TCGTTTTACC TAAAGGCAAA AGGTCAAGCA GAAGCAAAGA TAAAAGAGCT TGGATATAGC 
TCATTTCATA TCGCTAGGCT GCCACTTATC GAGGCTGAGA GAAAGGAATT TAGACTTGGC 
GAGTATCTGG CGATAAAGGC GTTTAAATTT ATCCCAAAAG GCTTTTTTGA CGAGTATCGT 
CCGATGAGAG CGGCTGACAT CGCTAAAGTG ATCGTGGAAG TAGCGCAAGA TGACCACAGC 
GAAGGCGTGA AAATTTATAG CCCGGTGGAG TATGCAAAGT GA
 
Protein sequence
MKKVALIAGA SGAVGSEILK DLCGSEHYNK VVALVRHELD FTHEKLEVKI VNFDDFKDEV 
PFIADDVFCA LGTTMKAAKH KEQFYKVDVT YPINFAKFGL ECGAKRFVLL SAAGANRKSG 
SFYLKAKGQA EAKIKELGYS SFHIARLPLI EAERKEFRLG EYLAIKAFKF IPKGFFDEYR 
PMRAADIAKV IVEVAQDDHS EGVKIYSPVE YAK